RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 APOA5Q6Q788 366 aa21■□□□□ 0.95
NPLOC4-201ENST00000331134 MAEAQ7L5Y9 396 aa21■□□□□ 0.95
NPLOC4-201ENST00000331134 CCDC170Q8IYT3 715 aa21■□□□□ 0.95
NPLOC4-201ENST00000331134 ANKRD42Q8N9B4 389 aa21■□□□□ 0.95
NPLOC4-201ENST00000331134 TRIM58Q8NG06 486 aa21■□□□□ 0.95
NPLOC4-201ENST00000331134 ACTN4O43707 911 aaKnown RBP20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 LDHBP07195 334 aaKnown RBP20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 POLR3EQ9NVU0 708 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 TMEM232C9JQI7 657 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 MYO1CO00159 1063 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 CYP27A1Q02318 531 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 IFT88Q13099 833 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 IFNL3Q8IZI9 196 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 COPB1P53618 953 aaKnown RBP20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 GSTO1P78417 241 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 CLEC17AQ6ZS10 378 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 TCHPQ9BT92 498 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 KCNF1Q9H3M0 494 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 ASIC3Q9UHC3 531 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 SH3TC1Q8TE82 1336 aa20.99■□□□□ 0.95
NPLOC4-201ENST00000331134 INF2Q27J81 1249 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 DPH6Q7L8W6 267 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 TTC16Q8NEE8 873 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.952e-10■□□□□ 10.8
NPLOC4-201ENST00000331134 STIM2Q9P246 746 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 MAST3O60307 1309 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 KDM5DQ9BY66 1539 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 ATP2A1O14983 1001 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 CYP2E1P05181 493 aaPredicted RBP20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 SP4Q02446 784 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 SMC6Q96SB8 1091 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 TNKSO95271 1327 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 PHLPP2Q6ZVD8 1323 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 IKBKBO14920 756 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 RPL13P26373 211 aaKnown RBP20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 SEL1L2Q5TEA6 688 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 SFMBT2Q5VUG0 894 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 PPP4R3AQ6IN85 833 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 RPGRIP1Q96KN7 1286 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 SLC39A2Q9NP94 309 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 CTTNBP2NLQ9P2B4 639 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 ZMYM6O95789 1325 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 CLTAP09496 248 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 TFAP4Q01664 338 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 CASP8Q14790 479 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 E2F5Q15329 346 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 LPIN2Q92539 896 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 GPKOWQ92917 476 aaPredicted RBP eCLIP20.98■□□□□ 0.957e-6■□□□□ 8.1
NPLOC4-201ENST00000331134 COPRSQ9NQ92 184 aa20.98■□□□□ 0.95
NPLOC4-201ENST00000331134 EHHADHQ08426 723 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 NONOQ15233 471 aaKnown RBP eCLIP20.97■□□□□ 0.956e-7■■■■□ 20.2
NPLOC4-201ENST00000331134 RDH13Q8NBN7 331 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 PEX19P40855 299 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 DNM2P50570 870 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 VSTM4Q8IW00 320 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 JRKLQ9Y4A0 524 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 HYOU1Q9Y4L1 999 aa20.97■□□□□ 0.95
NPLOC4-201ENST00000331134 B4DLN1 442 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 VPS41P49754 854 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 CASP1P29466 404 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 TOB2Q14106 344 aaPredicted RBP20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 DDX17Q92841 729 aaKnown RBP20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 TBC1D31Q96DN5 1066 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 A6NNZ2 444 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 RPSAP08865 295 aaKnown RBP20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 TUBB8Q3ZCM7 444 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 OSBP2Q969R2 916 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 FAM212AQ96EL1 285 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 GOLPH3LQ9H4A5 285 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 MAN1B1Q9UKM7 699 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 PCDHB13Q9Y5F0 798 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 EPB41P11171 864 aaKnown RBP20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 RFC4P35249 363 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 ARHGAP44Q17R89 818 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 ZMYM1Q5SVZ6 1142 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 EXOC4Q96A65 974 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 IFT74Q96LB3 600 aa20.96■□□□□ 0.95
NPLOC4-201ENST00000331134 KDM5AP29375 1690 aaKnown RBP20.95■□□□□ 0.95
NPLOC4-201ENST00000331134 ATP11AP98196 1134 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 CACNA2D3Q8IZS8 1091 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 TRIML1Q8N9V2 468 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 C19orf44Q9H6X5 657 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 KDRP35968 1356 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 TECP42680 631 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 IFNAR2P48551 515 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 PPARAQ07869 468 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 LLGL1Q15334 1064 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 CCDC105Q8IYK2 499 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 RIPOR2Q9Y4F9 1068 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 PAXIP1Q6ZW49 1069 aaPredicted RBP20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 TEX11Q8IYF3 940 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 RASGRP4Q8TDF6 673 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 UGGT1Q9NYU2 1555 aa20.95■□□□□ 0.94
NPLOC4-201ENST00000331134 RASSF7Q02833 373 aa20.94■□□□□ 0.94
NPLOC4-201ENST00000331134 APBB1IPQ7Z5R6 666 aaPredicted RBP20.94■□□□□ 0.94
NPLOC4-201ENST00000331134 ARHGEF2Q92974 986 aaKnown RBP20.94■□□□□ 0.94
NPLOC4-201ENST00000331134 EHMT1Q9H9B1 1298 aa20.94■□□□□ 0.94
NPLOC4-201ENST00000331134 SWAP70Q9UH65 585 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms