RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 NOX5Q96PH1 765 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 PSTPIP2Q9H939 334 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 CMA1P23946 247 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 CTNND2Q9UQB3 1225 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 MYL1P05976 194 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
COL4A5-201ENST00000328300 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 AK8Q96MA6 479 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 CSRNP2Q9H175 543 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 MTUS1Q9ULD2 1270 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 REREQ9P2R6 1566 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
COL4A5-201ENST00000328300 VPS72Q15906 364 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 GIMAP7Q8NHV1 300 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 TTLL1O95922 423 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 IBSPP21815 317 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-201ENST00000328300 TNNC1P63316 161 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 FOXP4Q8IVH2 680 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-201ENST00000328300 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-201ENST00000328300 TBC1D8BQ0IIM8 1120 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 AFF2P51816 1311 aa12.74□□□□□ -0.37
COL4A5-201ENST00000328300 CCNA1P78396 465 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 POLR2DO15514 142 aaKnown RBP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 HSF2BPO75031 334 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 LIFRP42702 1097 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 TCP10Q12799 353 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 TTC14Q96N46 770 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PLA2G12BQ9BX93 195 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 GAS7O60861 476 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-201ENST00000328300 CLCN1P35523 988 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PHKBQ93100 1093 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
COL4A5-201ENST00000328300 PPP6R2O75170 966 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 CFBP00751 764 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 M0QZ92 97 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 OPA1O60313 960 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-201ENST00000328300 ADORA1P30542 326 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 STX17P56962 302 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 VPS54Q9P1Q0 977 aa12.72□□□□□ -0.37
COL4A5-201ENST00000328300 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 BCRP11274 1271 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL4A5-201ENST00000328300 P4HA1P13674 534 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 TRPC3Q13507 836 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 KIF22Q14807 665 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
COL4A5-201ENST00000328300 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
COL4A5-201ENST00000328300 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
COL4A5-201ENST00000328300 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms