RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 FERMT2Q96AC1 680 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 MAN1B1Q9UKM7 699 aa13.74□□□□□ -0.21
NCL-201ENST00000322723 KIF20AO95235 890 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 GSDMDP57764 484 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 RHBDL3P58872 404 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 TPD52L1Q16890 204 aaPredicted RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 SMARCA1P28370 1054 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 RFC4P35249 363 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 DDR1Q08345 913 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 SH3RF3Q8TEJ3 882 aaPredicted RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 TRPC5Q9UL62 973 aaPredicted RBP13.73□□□□□ -0.21
NCL-201ENST00000322723 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 C16orf86Q6ZW13 317 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 INTS13Q9NVM9 706 aa13.73□□□□□ -0.21
NCL-201ENST00000322723 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 NMT2O60551 498 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 PDE4BQ07343 736 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
NCL-201ENST00000322723 TAF3Q5VWG9 929 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 APTXQ7Z2E3 356 aaKnown RBP13.72□□□□□ -0.21
NCL-201ENST00000322723 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 SCG2P13521 617 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 POSTNQ15063 836 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 SYCP1Q15431 976 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 SKIDA1Q1XH10 827 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 ARMCX5Q6P1M9 558 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 VPS54Q9P1Q0 977 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.213e-76■□□□□ 9.1
NCL-201ENST00000322723 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
NCL-201ENST00000322723 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
NCL-201ENST00000322723 FOXN1O15353 648 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 IL17AQ16552 155 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
NCL-201ENST00000322723 BBOX1O75936 387 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 LDHBP07195 334 aaKnown RBP13.71□□□□□ -0.21
NCL-201ENST00000322723 USP17L8P0C7I0 530 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 RASA1P20936 1047 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 MYL5Q02045 173 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 CCDC112Q8NEF3 446 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
NCL-201ENST00000322723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.22
NCL-201ENST00000322723 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.22
NCL-201ENST00000322723 CCAR2Q8N163 923 aaKnown RBP13.71□□□□□ -0.22
NCL-201ENST00000322723 ENOX1Q8TC92 643 aaKnown RBP13.71□□□□□ -0.22
NCL-201ENST00000322723 DPYDQ12882 1025 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 ARID5BQ14865 1188 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
NCL-201ENST00000322723 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 V9GY48 417 aaPredicted RBP13.7□□□□□ -0.22
NCL-201ENST00000322723 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 PRDM1O75626 825 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 XBP1P17861 261 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 GTF2E1P29083 439 aaPredicted RBP13.7□□□□□ -0.22
NCL-201ENST00000322723 CUL4BQ13620 913 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 PDXDC2PQ6P474 469 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 PROM2Q8N271 834 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 MLKLQ8NB16 471 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 ZBTB9Q96C00 473 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 CABP5Q9NP86 173 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
NCL-201ENST00000322723 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
NCL-201ENST00000322723 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
NCL-201ENST00000322723 BECN2A8MW95 431 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 FANCCQ00597 558 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 GABPAQ06546 454 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 GALNT17Q6IS24 598 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 USP49Q70CQ1 688 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 A0A0G2JS52 829 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 SERPINB2P05120 415 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 VEGFAP15692 232 aaPredicted RBP13.69□□□□□ -0.22
NCL-201ENST00000322723 ERCC5P28715 1186 aaPredicted RBP13.69□□□□□ -0.22
NCL-201ENST00000322723 VSTM4Q8IW00 320 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 POLLQ9UGP5 575 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 CYTH3O43739 400 aa13.69□□□□□ -0.22
NCL-201ENST00000322723 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms