RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NPY5RQ15761 445 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 UBXN4Q92575 508 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 EPC1Q9H2F5 836 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 CICQ96RK0 1608 aaPredicted RBP19.8■□□□□ 0.76
COL9A1-201ENST00000320755 MYO1BO43795 1136 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 CCT6AP40227 531 aaKnown RBP19.79■□□□□ 0.76
COL9A1-201ENST00000320755 DMTNQ08495 405 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 PRDM4Q9UKN5 801 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 THRAP3Q9Y2W1 955 aaKnown RBP19.79■□□□□ 0.76
COL9A1-201ENST00000320755 CNTNAP5Q8WYK1 1306 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 SYNRGQ9UMZ2 1314 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 BCORQ6W2J9 1755 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 SCG2P13521 617 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 NR1I3Q14994 352 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 DZIP1Q86YF9 867 aaKnown RBP19.79■□□□□ 0.76
COL9A1-201ENST00000320755 FERMT2Q96AC1 680 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 IRX2Q9BZI1 471 aaPredicted RBP19.79■□□□□ 0.76
COL9A1-201ENST00000320755 CTNND2Q9UQB3 1225 aa19.79■□□□□ 0.76
COL9A1-201ENST00000320755 SOWAHDA6NJG2 315 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 ERCC5P28715 1186 aaPredicted RBP19.78■□□□□ 0.76
COL9A1-201ENST00000320755 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 IGSF22Q8N9C0 903 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 SPATA20Q8TB22 786 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 LZTFL1Q9NQ48 299 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 TFAP4Q01664 338 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 RBL2Q08999 1139 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 SPATA1Q5VX52 437 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 PPFIBP1Q86W92 1011 aa19.78■□□□□ 0.76
COL9A1-201ENST00000320755 GNPATO15228 680 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 STX10O60499 249 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 DDAH1O94760 285 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 CASQ1P31415 396 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 RRAGBQ5VZM2 374 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 PLIN2Q99541 437 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 PHLPP2Q6ZVD8 1323 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 ZPR1O75312 459 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 USP5P45974 858 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 DPYDQ12882 1025 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 STAG2Q8N3U4 1231 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 RASSF8Q8NHQ8 419 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 ZNF446Q9NWS9 450 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL9A1-201ENST00000320755 MYH13Q9UKX3 1938 aa19.77■□□□□ 0.76
COL9A1-201ENST00000320755 TNFRSF25Q93038 417 aa19.77■□□□□ 0.75
COL9A1-201ENST00000320755 GPR101Q96P66 508 aaPredicted RBP19.77■□□□□ 0.75
COL9A1-201ENST00000320755 KAT14Q9H8E8 782 aa19.77■□□□□ 0.75
COL9A1-201ENST00000320755 ANKIB1Q9P2G1 1089 aa19.77■□□□□ 0.75
COL9A1-201ENST00000320755 AKR1B15C9JRZ8 316 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-201ENST00000320755 CUL4BQ13620 913 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 ST7Q9NRC1 585 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-201ENST00000320755 PHLPP1O60346 1717 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 A0A0U1RQJ8 604 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 A0A1B0GTH6 734 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 DIXDC1Q155Q3 683 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 IL17AQ16552 155 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 IQUBQ8NA54 791 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 ATRIPQ8WXE1 791 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 ZSWIM4Q9H7M6 989 aa19.76■□□□□ 0.75
COL9A1-201ENST00000320755 MORC2Q9Y6X9 1032 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-201ENST00000320755 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 USP17L3A6NCW0 530 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 USP17L4A6NCW7 530 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 PPP1R3GB7ZBB8 358 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 ATP2C1P98194 919 aaPredicted RBP19.75■□□□□ 0.75
COL9A1-201ENST00000320755 USP17L1Q7RTZ2 530 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 VPS16Q9H269 839 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 XDHP47989 1333 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 BMP15O95972 392 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 FGRP09769 529 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 CLCN6P51797 869 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 SH3RF1Q7Z6J0 888 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 KRT222Q8N1A0 295 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 SLC44A5Q8NCS7 719 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 GSDMAQ96QA5 445 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 MKNK2Q9HBH9 465 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 ATP8A2Q9NTI2 1148 aa19.75■□□□□ 0.75
COL9A1-201ENST00000320755 TUBB4AP04350 444 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 RCSD1Q6JBY9 416 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 MRPL44Q9H9J2 332 aaKnown RBP19.74■□□□□ 0.75
COL9A1-201ENST00000320755 ORC4O43929 436 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 STX8Q9UNK0 236 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 DUOX1Q9NRD9 1551 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 ROBO1Q9Y6N7 1651 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 CASP14P31944 242 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
COL9A1-201ENST00000320755 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 ZNF771Q7L3S4 317 aaPredicted RBP19.74■□□□□ 0.75
COL9A1-201ENST00000320755 FCHSD1Q86WN1 690 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 CPVLQ9H3G5 476 aa19.74■□□□□ 0.75
COL9A1-201ENST00000320755 SAP30BPQ9UHR5 308 aaKnown RBP19.74■□□□□ 0.75
COL9A1-201ENST00000320755 PES1O00541 588 aaKnown RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 N4BP3O15049 544 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 TPTE2Q6XPS3 522 aa19.73■□□□□ 0.75
COL9A1-201ENST00000320755 APTXQ7Z2E3 356 aaKnown RBP19.73■□□□□ 0.75
COL9A1-201ENST00000320755 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms