RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KCNJ6P48051 423 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 VPS72Q15906 364 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 DHX58Q96C10 678 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 EPSTI1Q96J88 318 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 CSRNP2Q9H175 543 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 H3BQF6 201 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 C4AP0C0L4 1744 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 C4BP0C0L5 1744 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 WDR24Q96S15 920 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 ADAM21Q9UKJ8 722 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 UTRNP46939 3433 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 CUTAO60888 179 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 FANCCQ00597 558 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 PDE4BQ07343 736 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 CFAP100Q494V2 611 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 KLHL10Q6JEL2 608 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 FUT8Q9BYC5 575 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 LRP5O75197 1615 aa17.68■□□□□ 0.42
SHROOM1-201ENST00000319854 NOP2P46087 812 aaKnown RBP17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 FANCLQ9NW38 375 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 HPSEQ9Y251 543 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 VWA3AA6NCI4 1184 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 PKN1Q16512 942 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 RASGRP2Q7LDG7 609 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 CNBD1Q8NA66 436 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 PARD6BQ9BYG5 372 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 CPVLQ9H3G5 476 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 LMAN1P49257 510 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 RILPL1Q5EBL4 403 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 MAPKAPK5Q8IW41 473 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 SRBD1Q8N5C6 995 aaKnown RBP17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 CTCFLQ8NI51 663 aaPredicted RBP17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
SHROOM1-201ENST00000319854 CNTNAP4Q9C0A0 1308 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 TROAPQ12815 778 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 FBXO2Q9UK22 296 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 CICQ96RK0 1608 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 STK36Q9NRP7 1315 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 TMEM232C9JQI7 657 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 BMP6P22004 513 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 CDC25AP30304 524 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 TFAP4Q01664 338 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 RASGRP4Q8TDF6 673 aa17.66■□□□□ 0.42
SHROOM1-201ENST00000319854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 ATP8B1O43520 1251 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 XBP1P17861 261 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 TM4SF1P30408 202 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 SLC10A5Q5PT55 438 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 PIK3AP1Q6ZUJ8 805 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 BRIP1Q9BX63 1249 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 ANKRD2Q9GZV1 360 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 FOXP1Q9H334 677 aaPredicted RBP17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 MKNK2Q9HBH9 465 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 TRIM75PA6NK02 468 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 LDHBP07195 334 aaKnown RBP17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 LRRC4BQ9NT99 713 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 KRT2P35908 639 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 STX17P56962 302 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 UBASH3AP57075 661 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 NLRP5P59047 1200 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 SMYD4Q8IYR2 804 aaPredicted RBP17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 BPIFA3Q9BQP9 254 aa17.65■□□□□ 0.42
SHROOM1-201ENST00000319854 COL22A1Q8NFW1 1626 aaPredicted RBP17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 TUBB4AP04350 444 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 GOLGA8HP0CJ92 632 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 MCM7P33993 719 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 GPS2Q13227 327 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 POSTNQ15063 836 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 FOXR1Q6PIV2 292 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 SRLQ86TD4 932 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 SRRTQ9BXP5 876 aaKnown RBP17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 MAP3K9P80192 1104 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 RSRC2Q7L4I2 434 aaKnown RBP17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 ANAPC4Q9UJX5 808 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 CHD4Q14839 1912 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.41
SHROOM1-201ENST00000319854 F8W031 263 aaPredicted RBP17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 PTPREP23469 700 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 IRX3P78415 501 aaPredicted RBP17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 GPR161Q8N6U8 529 aaKnown RBP17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 RRP15Q9Y3B9 282 aaKnown RBP17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 MYL5Q02045 173 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 TMEM139Q8IV31 216 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 ZSWIM4Q9H7M6 989 aa17.63■□□□□ 0.41
SHROOM1-201ENST00000319854 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms