RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
USH1C-202ENST00000318024 ORC3Q9UBD5 711 aaPredicted RBP18.19■□□□□ 0.5
USH1C-202ENST00000318024 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
USH1C-202ENST00000318024 TULP2O00295 520 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 PLCD1P51178 756 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 ARHGAP29Q52LW3 1261 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 FAM47AQ5JRC9 791 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 ESR2Q92731 530 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 PCDHAC2Q9Y5I4 1007 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 ZNF202O95125 648 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 FANCCQ00597 558 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 REXO1L1PQ8IX06 675 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.18■□□□□ 0.5
USH1C-202ENST00000318024 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
USH1C-202ENST00000318024 GAKO14976 1311 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 TADA3O75528 432 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 SLC3A2P08195 630 aaKnown RBP18.17■□□□□ 0.5
USH1C-202ENST00000318024 PICALMQ13492 652 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 MYSM1Q5VVJ2 828 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 APOA5Q6Q788 366 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 UBAC1Q9BSL1 405 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 TAOK2Q9UL54 1235 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 SNED1Q8TER0 1413 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 MAST2Q6P0Q8 1798 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 USP17L3A6NCW0 530 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 USP17L4A6NCW7 530 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 SPTLC2O15270 562 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 NMT2O60551 498 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 POLR3DP05423 398 aaPredicted RBP18.17■□□□□ 0.5
USH1C-202ENST00000318024 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
USH1C-202ENST00000318024 WTAPQ15007 396 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 SBK1Q52WX2 424 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 DACT2Q5SW24 774 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 C12orf60Q5U649 245 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 USP17L1Q7RTZ2 530 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
USH1C-202ENST00000318024 ERICH2A1L162 156 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 CMA1P23946 247 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 STK38Q15208 465 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 CALCOCO1Q9P1Z2 691 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
USH1C-202ENST00000318024 CPLX1O14810 134 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 ATP1A3P13637 1013 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 CDC27P30260 824 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 LIFRP42702 1097 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 METAP2P50579 478 aaKnown RBP eCLIP18.15■□□□□ 0.5
USH1C-202ENST00000318024 TGFB2P61812 414 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 SART3Q15020 963 aaKnown RBP18.15■□□□□ 0.5
USH1C-202ENST00000318024 TMEM139Q8IV31 216 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 DPF2Q92785 391 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 TNKSO95271 1327 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 FLT1P17948 1338 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 ZBTB43O43298 467 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 FGRP09769 529 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
USH1C-202ENST00000318024 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 SGMS1Q86VZ5 419 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 SRRTQ9BXP5 876 aaKnown RBP18.15■□□□□ 0.5
USH1C-202ENST00000318024 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
USH1C-202ENST00000318024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
USH1C-202ENST00000318024 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 BIN1O00499 593 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 CCP110O43303 1012 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 ATP8B1O43520 1251 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 PFKFB1P16118 471 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 PLCG2P16885 1265 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 PDE4BQ07343 736 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 RGS22Q8NE09 1264 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 TIAM2Q8IVF5 1701 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 RAD17O75943 681 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 LMOD1P29536 600 aaPredicted RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 CRKP46108 304 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.49
USH1C-202ENST00000318024 HPSEQ9Y251 543 aa18.14■□□□□ 0.49
USH1C-202ENST00000318024 FAM237AA0A1B0GTK4 181 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 ERICH4A6NGS2 130 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 CACNB3P54284 484 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
USH1C-202ENST00000318024 MKNK2Q9HBH9 465 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms