RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 BRIP1Q9BX63 1249 aa11.26□□□□□ -0.61
GPHN-201ENST00000315266 KCNF1Q9H3M0 494 aa11.26□□□□□ -0.61
GPHN-201ENST00000315266 HDAC9Q9UKV0 1011 aa11.26□□□□□ -0.61
GPHN-201ENST00000315266 RFX7Q2KHR2 1363 aa11.26□□□□□ -0.61
GPHN-201ENST00000315266 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
GPHN-201ENST00000315266 KRT2P35908 639 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 UBXN2AP68543 259 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 CCDC174Q6PII3 467 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 TMEM87BQ96K49 555 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
GPHN-201ENST00000315266 TBC1D7Q9P0N9 293 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 ASIC1P78348 528 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 GPS2Q13227 327 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 UBE3CQ15386 1083 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
GPHN-201ENST00000315266 ARID5AQ03989 594 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
GPHN-201ENST00000315266 SMARCC2Q8TAQ2 1214 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 CUL5Q93034 780 aa11.25□□□□□ -0.61
GPHN-201ENST00000315266 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
GPHN-201ENST00000315266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.618e-7■■■■■ 91.5
GPHN-201ENST00000315266 CFBP00751 764 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
GPHN-201ENST00000315266 ARHGAP29Q52LW3 1261 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 LRRC8AQ8IWT6 810 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 XPO4Q9C0E2 1151 aaKnown RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 BTAF1O14981 1849 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 UBE2Q2LH0YL09 131 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 AP5Z1O43299 807 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 CCT6AP40227 531 aaKnown RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 MTIF2P46199 727 aaKnown RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 TBC1D10BQ4KMP7 808 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 CYB5R4Q7L1T6 521 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 NSUN7Q8NE18 718 aaKnown RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 TEKT1Q969V4 418 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 MASTLQ96GX5 879 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 POLD4Q9HCU8 107 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 N4BP3O15049 544 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 INF2Q27J81 1249 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 GRAMD1CQ8IYS0 662 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 FAM84BQ96KN1 310 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
GPHN-201ENST00000315266 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
GPHN-201ENST00000315266 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 ZNF202O95125 648 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 CASQ1P31415 396 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 CCDC144BQ3MJ40 725 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
GPHN-201ENST00000315266 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 THSD7AQ9UPZ6 1657 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 PLCG2P16885 1265 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 USP8P40818 1118 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 PNOCQ13519 176 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 KCNH3Q9ULD8 1083 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 ELP1O95163 1332 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
GPHN-201ENST00000315266 NDUFA8P51970 172 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 NSMFQ6X4W1 530 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
GPHN-201ENST00000315266 GTPBP4Q9BZE4 634 aaKnown RBP11.23□□□□□ -0.61
GPHN-201ENST00000315266 NUP98P52948 1817 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 DEXIO95424 95 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 RESTQ13127 1097 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 KARSQ15046 597 aaKnown RBP11.22□□□□□ -0.61
GPHN-201ENST00000315266 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
GPHN-201ENST00000315266 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
GPHN-201ENST00000315266 TJP1Q07157 1748 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 PFKFB2O60825 505 aa11.22□□□□□ -0.61
GPHN-201ENST00000315266 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
GPHN-201ENST00000315266 NEDD4P46934 1319 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms