RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CERKLQ49MI3 558 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 TATDN1Q6P1N9 297 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 FAM151AQ8WW52 585 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 CSRNP1Q96S65 589 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 FOXP1Q9H334 677 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 SIPA1L1O43166 1804 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 PALM3A6NDB9 673 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 TCP10L2B9ZVM9 353 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 SOCS7O14512 581 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 YBX3P16989 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 DIS3L2Q8IYB7 885 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 TMEM63CQ9P1W3 806 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 HERC5Q9UII4 1024 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 KCNJ14Q9UNX9 436 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 FZD9O00144 591 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 SCG2P13521 617 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 PFKFB3Q16875 520 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 NOSTRINQ8IVI9 506 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 STAG2Q8N3U4 1231 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 CLIP2Q9UDT6 1046 aa18.14■□□□□ 0.49
HERPUD1-201ENST00000300302 YEATS4O95619 227 aa18.13■□□□□ 0.49
HERPUD1-201ENST00000300302 VEZTQ9HBM0 779 aa18.13■□□□□ 0.49
HERPUD1-201ENST00000300302 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
HERPUD1-201ENST00000300302 GREB1LQ9C091 1923 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 hCG_1642624A0A1W2PR95 340 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 GOLGA6L3A6NEY3 463 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 KLRF2D3W0D1 207 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 SMARCA1P28370 1054 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 ZNF280AP59817 542 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 ZNF445P59923 1031 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 ZBED3Q96IU2 234 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 PHF20Q9BVI0 1012 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 FAM196BA6NMK8 535 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 WNT10BO00744 389 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 STK38Q15208 465 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 TMEM179Q6ZVK1 233 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 KCNG4Q8TDN1 519 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 DPF2Q92785 391 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 SPZ1Q9BXG8 430 aa18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 FTOQ9C0B1 505 aaKnown RBP eCLIP18.12■□□□□ 0.49
HERPUD1-201ENST00000300302 KRT2P35908 639 aa18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 NASPP49321 788 aaPredicted RBP18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 CCDC183Q5T5S1 534 aa18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 ANO1Q5XXA6 986 aa18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 BICD2Q8TD16 824 aa18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 SH3GLB2Q9NR46 395 aa18.11■□□□□ 0.49
HERPUD1-201ENST00000300302 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 PDHBP11177 359 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 ME1P48163 572 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 TNNI2P48788 182 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 USP17L2Q6R6M4 530 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 LRRC47Q8N1G4 583 aaKnown RBP18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 LINC00301Q8NCQ3 95 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.1■□□□□ 0.494e-7■□□□□ 11
HERPUD1-201ENST00000300302 CLIC4Q9Y696 253 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 GJA3Q9Y6H8 435 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 UTRNP46939 3433 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
HERPUD1-201ENST00000300302 USP17L5A8MUK1 530 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 RBM26Q5T8P6 1007 aaKnown RBP18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 FAM177A1Q8N128 213 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 PIBF1Q8WXW3 757 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 NYAP2Q9P242 653 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 LMNB1P20700 586 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 CALML3P27482 149 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 GMPSP49915 693 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 NLRP5P59047 1200 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 NBPF9Q3BBW0 867 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 CLEC10AQ8IUN9 316 aa18.09■□□□□ 0.49
HERPUD1-201ENST00000300302 FSD2A1L4K1 749 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 SPTLC2O15270 562 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 CYTH3O43739 400 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 TNFAIP1Q13829 316 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 MICALL2Q8IY33 904 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 MKL1Q969V6 931 aa18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.49
HERPUD1-201ENST00000300302 ZNF541Q9H0D2 1346 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms