RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 PES1O00541 588 aaKnown RBP15.45■□□□□ 0.06
CDH8-201ENST00000299345 ADKP55263 362 aaKnown RBP15.45■□□□□ 0.06
CDH8-201ENST00000299345 ETF1P62495 437 aaKnown RBP15.45■□□□□ 0.06
CDH8-201ENST00000299345 VPS72Q15906 364 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 SBK1Q52WX2 424 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 ANKRD7Q92527 254 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 GPKOWQ92917 476 aaPredicted RBP eCLIP15.45■□□□□ 0.06
CDH8-201ENST00000299345 LEMD3Q9Y2U8 911 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 CNTNAP5Q8WYK1 1306 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 KCNJ6P48051 423 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 TRAPPC10P48553 1259 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 BLIDQ8IZY5 108 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 HSD3B7Q9H2F3 369 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 PFKFB3Q16875 520 aaPredicted RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 USP21Q9UK80 565 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 RGL2O15211 777 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 NOM1Q5C9Z4 860 aaKnown RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 SPATA1Q5VX52 437 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 CCDC148Q8NFR7 591 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 FGRP09769 529 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 SARSP49591 514 aaKnown RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 TMED8Q6PL24 325 aaPredicted RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 CTAGE1Q96RT6 745 aa15.44■□□□□ 0.06
CDH8-201ENST00000299345 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.44■□□□□ 0.06
CDH8-201ENST00000299345 AHDC1Q5TGY3 1603 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 GOLGA6L9A6NEM1 432 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 PRKCSHP14314 528 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 UBA7P41226 1012 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 STAT6P42226 847 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 GRAPQ13588 217 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 NT5DC1Q5TFE4 455 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 GRAPLQ8TC17 118 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 SH3RF3Q8TEJ3 882 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 XDHP47989 1333 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 PDS5AQ29RF7 1337 aaKnown RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 UFL1O94874 794 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 GNG11P61952 73 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 FAM196AQ6ZSG2 479 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 GPR101Q96P66 508 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 PRDM10Q9NQV6 1147 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 ATP2C1P98194 919 aaPredicted RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 ELF2Q15723 593 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 DTHD1Q6ZMT9 781 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 UBXN4Q92575 508 aa15.43■□□□□ 0.06
CDH8-201ENST00000299345 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
CDH8-201ENST00000299345 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 RASGRP4Q8TDF6 673 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 RMND1Q9NWS8 449 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 CTNND2Q9UQB3 1225 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
CDH8-201ENST00000299345 AKR1B15C9JRZ8 316 aaPredicted RBP15.42■□□□□ 0.06
CDH8-201ENST00000299345 N4BP3O15049 544 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 IGSF22Q8N9C0 903 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 TMX1Q9H3N1 280 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 KCND1Q9NSA2 647 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 TEX11Q8IYF3 940 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 ZNF397Q8NF99 534 aaPredicted RBP15.42■□□□□ 0.06
CDH8-201ENST00000299345 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
CDH8-201ENST00000299345 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 STX10O60499 249 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 CT47A1Q5JQC4 288 aaPredicted RBP15.41■□□□□ 0.06
CDH8-201ENST00000299345 CCDC47Q96A33 483 aaKnown RBP15.41■□□□□ 0.06
CDH8-201ENST00000299345 FEZ1Q99689 392 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 A0A087X0B3 334 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 CDC25AP30304 524 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 CASQ1P31415 396 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 NFIXQ14938 502 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 ST5P78524 1137 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
CDH8-201ENST00000299345 PCDHA4Q9UN74 947 aa15.41■□□□□ 0.06
CDH8-201ENST00000299345 PLCH1Q4KWH8 1693 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 NAPAP54920 295 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 MAPK8IP1Q9UQF2 711 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 WNT7AO00755 349 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 GOLGA8HP0CJ92 632 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 ZNF18P17022 549 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 CCT6AP40227 531 aaKnown RBP15.4■□□□□ 0.06
CDH8-201ENST00000299345 SPAG1Q07617 926 aa15.4■□□□□ 0.06
CDH8-201ENST00000299345 STIM1Q13586 685 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms