RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 PTGDRQ13258 359 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 SEPT2Q15019 361 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 UTYO14607 1347 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 FAM170AA1A519 330 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 KIF20AO95235 890 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 HARSP12081 509 aaKnown RBP11.5□□□□□ -0.57
GABRB3-201ENST00000299267 CUL4AQ13619 759 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 KRT25Q7Z3Z0 450 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
GABRB3-201ENST00000299267 ZNF397Q8NF99 534 aaPredicted RBP11.5□□□□□ -0.57
GABRB3-201ENST00000299267 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 SERTAD1Q9UHV2 236 aa11.5□□□□□ -0.57
GABRB3-201ENST00000299267 FAM13AO94988 1023 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
GABRB3-201ENST00000299267 PNOCQ13519 176 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 DCAF15Q66K64 600 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 CCDC17Q96LX7 622 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 KIF2CQ99661 725 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 PYM1Q9BRP8 204 aaKnown RBP11.49□□□□□ -0.57
GABRB3-201ENST00000299267 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 RTEL1Q9NZ71 1219 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 ZNF609O15014 1411 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 ENAHQ8N8S7 591 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-201ENST00000299267 RMND1Q9NWS8 449 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 NEMFO60524 1076 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 PDE4DQ08499 809 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 SV2BQ7L1I2 683 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 CEP95Q96GE4 821 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 MYOM1P52179 1685 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 CUTAO60888 179 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 GPT2Q8TD30 523 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 CRAMP1Q96RY5 1269 aa11.49□□□□□ -0.57
GABRB3-201ENST00000299267 FGFR1OPO95684 399 aaKnown RBP11.48□□□□□ -0.57
GABRB3-201ENST00000299267 PFKFB1P16118 471 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 POLLQ9UGP5 575 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 MROH7-TTC4A0A0A0MT08 1334 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 COBLO75128 1261 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 TMEM47Q9BQJ4 181 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 CDC27P30260 824 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-201ENST00000299267 SPON1Q9HCB6 807 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
GABRB3-201ENST00000299267 DDAH1O94760 285 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 CASP7P55210 303 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 UBE2SQ16763 222 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 HERC4Q5GLZ8 1057 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-201ENST00000299267 NELFCDQ8IXH7 590 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 VPS16Q9H269 839 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 PUF60Q9UHX1 559 aaKnown RBP11.47□□□□□ -0.57
GABRB3-201ENST00000299267 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 TRAF5O00463 557 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 IFNAR1P17181 557 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 HOXA13P31271 388 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-201ENST00000299267 LIFRP42702 1097 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 NDUFA8P51970 172 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 MPHOSPH6Q99547 160 aaKnown RBP11.47□□□□□ -0.57
GABRB3-201ENST00000299267 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 PLCD1P51178 756 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 SPA17Q15506 151 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 PTPN14Q15678 1187 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 CABP7Q86V35 215 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 NCAPG2Q86XI2 1143 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 ZNF341Q9BYN7 854 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 DHX36Q9H2U1 1008 aaKnown RBP11.47□□□□□ -0.57
GABRB3-201ENST00000299267 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 YEATS4O95619 227 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 BMP3P12645 472 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 ANKRD35Q8N283 1001 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 CLSTN2Q9H4D0 955 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
GABRB3-201ENST00000299267 BAZ2BQ9UIF8 2168 aaKnown RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 CEP135Q66GS9 1140 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 EEPD1Q7L9B9 569 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 FBXO33Q7Z6M2 555 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 MB21D2Q8IYB1 491 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 GOLGA6L1Q8N7Z2 621 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 AKR1B1P15121 316 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 KIF23Q02241 960 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 ADALQ6DHV7 355 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 STAG1Q8WVM7 1258 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 SPAG5Q96R06 1193 aa11.46□□□□□ -0.57
GABRB3-201ENST00000299267 LUC7LQ9NQ29 371 aaKnown RBP11.46□□□□□ -0.57
GABRB3-201ENST00000299267 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms