RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
RFC4-201ENST00000296273 SHCBP1Q8NEM2 672 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 NPLOC4Q8TAT6 608 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 CCDC8Q9H0W5 538 aaPredicted RBP12.79□□□□□ -0.36
RFC4-201ENST00000296273 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
RFC4-201ENST00000296273 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 IGHA2P01877 340 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
RFC4-201ENST00000296273 CYP2C19P33261 490 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 SHMT1P34896 483 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
RFC4-201ENST00000296273 RTP1P59025 263 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFC4-201ENST00000296273 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
RFC4-201ENST00000296273 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
RFC4-201ENST00000296273 MYO5AQ9Y4I1 1855 aaKnown RBP12.77□□□□□ -0.36
RFC4-201ENST00000296273 SEPT4O43236 478 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 ADORA2AP29274 412 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 PLCD1P51178 756 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 GABPAQ06546 454 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 GUCD1Q96NT3 240 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 SPATC1LQ9H0A9 340 aa12.77□□□□□ -0.37
RFC4-201ENST00000296273 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.37
RFC4-201ENST00000296273 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 SEPT2Q15019 361 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 SNX17Q15036 470 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 SLC39A5Q6ZMH5 540 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 CRNKL1Q9BZJ0 848 aaKnown RBP12.76□□□□□ -0.37
RFC4-201ENST00000296273 MROH8Q9H579 483 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
RFC4-201ENST00000296273 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 MPHOSPH10O00566 681 aaKnown RBP12.75□□□□□ -0.37
RFC4-201ENST00000296273 ERCC3P19447 782 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
RFC4-201ENST00000296273 TMEM179Q6ZVK1 233 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
RFC4-201ENST00000296273 A0A0C4DFX4 3053 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 HSP90AB4PQ58FF6 505 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 FAM161BQ96MY7 647 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 ARHGEF10LQ9HCE6 1279 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
RFC4-201ENST00000296273 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 A0A1W2PRG0 241 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 DSG3P32926 999 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
RFC4-201ENST00000296273 SHHQ15465 462 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 SLC9C2Q5TAH2 1124 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 AACSQ86V21 672 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
RFC4-201ENST00000296273 RLFQ13129 1914 aa12.73□□□□□ -0.37
RFC4-201ENST00000296273 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 COBLO75128 1261 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 FLOT1O75955 427 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 SLC25A27O95847 323 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 FCER1AP12319 257 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 PLS1Q14651 629 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFC4-201ENST00000296273 BADQ92934 168 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 CDX2Q99626 313 aaPredicted RBP12.72□□□□□ -0.37
RFC4-201ENST00000296273 SEMA6BQ9H3T3 888 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
RFC4-201ENST00000296273 PDLIM7Q9NR12 457 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 TACC3Q9Y6A5 838 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
RFC4-201ENST00000296273 TMEM265A0A087WTH1 108 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 WDR46O15213 610 aaKnown RBP12.71□□□□□ -0.37
RFC4-201ENST00000296273 PDE6AP16499 860 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 ADCYAP1R1P41586 468 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
RFC4-201ENST00000296273 LRRC41Q15345 812 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 TRIM60Q495X7 471 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 BACH2Q9BYV9 841 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms