RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 MTMR2Q13614 643 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 MOGSQ13724 837 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
SSX2B-201ENST00000288839 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 ZNF280CQ8ND82 737 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 MKNK2Q9HBH9 465 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 CABP5Q9NP86 173 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 KIAA0100Q14667 2235 aaKnown RBP8.13□□□□□ -1.11
SSX2B-201ENST00000288839 PHIPQ8WWQ0 1821 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 ATAD5Q96QE3 1844 aa8.13□□□□□ -1.11
SSX2B-201ENST00000288839 RAD50Q92878 1312 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 PTPRFP10586 1907 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
SSX2B-201ENST00000288839 CXCL11O14625 94 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 HMGCS2P54868 508 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 INHBEP58166 350 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 TMEM179Q6ZVK1 233 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
SSX2B-201ENST00000288839 CTU1Q7Z7A3 348 aaKnown RBP8.12□□□□□ -1.11
SSX2B-201ENST00000288839 TBC1D10CQ8IV04 446 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 CD99L2Q8TCZ2 262 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 ACER1Q8TDN7 264 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 FEZ1Q99689 392 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 DSCC1Q9BVC3 393 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 ARHGAP39Q9C0H5 1083 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 AS3MTQ9HBK9 375 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 GINM1Q9NU53 330 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 CEP290O15078 2479 aa8.12□□□□□ -1.11
SSX2B-201ENST00000288839 A0A1W2PRG0 241 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 PDHXO00330 501 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 CDC45O75419 566 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
SSX2B-201ENST00000288839 EMP3P54852 163 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 ATP2B2Q01814 1243 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 PDE4BQ07343 736 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 RRP12Q5JTH9 1297 aaKnown RBP8.11□□□□□ -1.11
SSX2B-201ENST00000288839 TREML2Q5T2D2 321 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 OTUD7BQ6GQQ9 843 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 ZNF444Q8N0Y2 327 aaPredicted RBP8.11□□□□□ -1.11
SSX2B-201ENST00000288839 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 CCDC17Q96LX7 622 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSX2B-201ENST00000288839 TBC1D2Q9BYX2 928 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 TOMM22Q9NS69 142 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 ANAPC4Q9UJX5 808 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
SSX2B-201ENST00000288839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSX2B-201ENST00000288839 ZMYM6O95789 1325 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 USP17L10C9JJH3 530 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 ZNF213O14771 459 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 RANBP6O60518 1105 aaKnown RBP8.1□□□□□ -1.11
SSX2B-201ENST00000288839 FKTNO75072 461 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
SSX2B-201ENST00000288839 BACE1P56817 501 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 TFAP4Q01664 338 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 ICA1Q05084 483 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 TAF1CQ15572 869 aaPredicted RBP8.1□□□□□ -1.11
SSX2B-201ENST00000288839 SH3D19Q5HYK7 790 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 FASTKD5Q7L8L6 764 aaKnown RBP8.1□□□□□ -1.11
SSX2B-201ENST00000288839 ANKRD23Q86SG2 305 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 SIAH1Q8IUQ4 282 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 STAG1Q8WVM7 1258 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 EMILIN3Q9NT22 766 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 TMOD4Q9NZQ9 345 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 CTNNA3Q9UI47 895 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 AGTPBP1Q9UPW5 1226 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 TRIM17Q9Y577 477 aa8.1□□□□□ -1.11
SSX2B-201ENST00000288839 MYH8P13535 1937 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 NEDD4P46934 1319 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 IGKV6D-41A0A0C4DH26 115 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 TSPY2A6NKD2 308 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 C19orf81C9J6K1 198 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 ORC4O43929 436 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 NMT2O60551 498 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 ALDH1A1P00352 501 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 TSPY3P0CV98 308 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 TSPY8P0CW00 308 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 CYP2C8P10632 490 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 CTGFP29279 349 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 IMMTQ16891 758 aaKnown RBP8.09□□□□□ -1.11
SSX2B-201ENST00000288839 KIAA1755Q5JYT7 1200 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 AKNAD1Q5T1N1 836 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 CASC1Q6TDU7 716 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 OTOP1Q7RTM1 612 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
SSX2B-201ENST00000288839 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
SSX2B-201ENST00000288839 CEP95Q96GE4 821 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms