RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 C19orf81C9J6K1 198 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 DPYSL4O14531 572 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 ZMYND10O75800 440 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 AKR1B1P15121 316 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 NOVP48745 357 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-201ENST00000288344 SEPT2Q15019 361 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 LRRFIP1Q32MZ4 808 aaKnown RBP10.98□□□□□ -0.65
HMGN1-201ENST00000288344 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-201ENST00000288344 NKX2-3Q8TAU0 364 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 AGTPBP1Q9UPW5 1226 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 DOCK3Q8IZD9 2030 aa10.98□□□□□ -0.65
HMGN1-201ENST00000288344 C2orf72A6NCS6 295 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 FKTNO75072 461 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 FGAP02671 866 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 CYP2C8P10632 490 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
HMGN1-201ENST00000288344 RASA1P20936 1047 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 TAF1CQ15572 869 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-201ENST00000288344 ABCB5Q2M3G0 1257 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 SKAP1Q86WV1 359 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 CCDC17Q96LX7 622 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 ZFYVE28Q9HCC9 887 aa10.97□□□□□ -0.65
HMGN1-201ENST00000288344 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-201ENST00000288344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
HMGN1-201ENST00000288344 HMGCS2P54868 508 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 SP3Q02447 781 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 MTMR2Q13614 643 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 TMEM179Q6ZVK1 233 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 TMC2Q8TDI7 906 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 MKL1Q969V6 931 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 MCOLN1Q9GZU1 580 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 NBPF3Q9H094 633 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
HMGN1-201ENST00000288344 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 SNPHO15079 494 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 CENPQQ7L2Z9 268 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-201ENST00000288344 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
HMGN1-201ENST00000288344 PLPP6Q8IY26 295 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 RILPL2Q969X0 211 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 P2RX7Q99572 595 aaKnown RBP10.95□□□□□ -0.66
HMGN1-201ENST00000288344 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 TMX2Q9Y320 296 aa10.95□□□□□ -0.66
HMGN1-201ENST00000288344 ZSWIM8A7E2V4 1837 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 MYH8P13535 1937 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 CHMLP26374 656 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 LACTBP83111 547 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-201ENST00000288344 PPARAQ07869 468 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 LBX2Q6XYB7 198 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 CATSPERGQ6ZRH7 1159 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 ARHGAP39Q9C0H5 1083 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-201ENST00000288344 IL17RBQ9NRM6 502 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 RBPJLQ9UBG7 517 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 MORF4L1Q9UBU8 362 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 CPA4Q9UI42 421 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 ADAMTS5Q9UNA0 930 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
HMGN1-201ENST00000288344 MINDY4BA8MYZ0 360 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 PKN2Q16513 984 aaKnown RBP10.93□□□□□ -0.66
HMGN1-201ENST00000288344 Q3C1V9 767 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 CLEC10AQ8IUN9 316 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 CD99L2Q8TCZ2 262 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 TXNRD2Q9NNW7 524 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
HMGN1-201ENST00000288344 ORC4O43929 436 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 CNMDO75829 334 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 EEF2P13639 858 aaKnown RBP10.92□□□□□ -0.66
HMGN1-201ENST00000288344 RAB3GAP1Q15042 981 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 ERICH6BQ5W0A0 696 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
HMGN1-201ENST00000288344 ABHD8Q96I13 439 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 TRIM47Q96LD4 638 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 PARK7Q99497 189 aaKnown RBP10.92□□□□□ -0.66
HMGN1-201ENST00000288344 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 NACAP1Q9BZK3 213 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 CABP5Q9NP86 173 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 MTMR4Q9NYA4 1195 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 PTPN22Q9Y2R2 807 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-201ENST00000288344 PARP14Q460N5 1801 aa10.92□□□□□ -0.66
HMGN1-201ENST00000288344 MGAMO43451 1857 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms