RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RBM28Q9NW13 759 aaKnown RBP22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 SMARCC2Q8TAQ2 1214 aa22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 SYNPO2Q9UMS6 1093 aa22.04■■□□□ 1.12
PDLIM3-202ENST00000284770 KIF5BP33176 963 aa22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 PRKG1Q13976 671 aa22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 NTRK3Q16288 839 aa22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 CPLX2Q6PUV4 134 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 SCYL3Q8IZE3 742 aa22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 ARHGEF10LQ9HCE6 1279 aa22.03■■□□□ 1.12
PDLIM3-202ENST00000284770 CDKL5O76039 1030 aa22.02■■□□□ 1.12
PDLIM3-202ENST00000284770 GRM4Q14833 912 aa22.02■■□□□ 1.12
PDLIM3-202ENST00000284770 ZKSCAN4Q969J2 545 aaPredicted RBP22.02■■□□□ 1.12
PDLIM3-202ENST00000284770 JAK2O60674 1132 aa22.02■■□□□ 1.11
PDLIM3-202ENST00000284770 DTNBO60941 627 aa22.02■■□□□ 1.11
PDLIM3-202ENST00000284770 GJB2P29033 226 aa22.02■■□□□ 1.11
PDLIM3-202ENST00000284770 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.02■■□□□ 1.11
PDLIM3-202ENST00000284770 A0A1W2PRG0 241 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 PTPDC1A2A3K4 754 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 PDHBP11177 359 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 HMGN5P82970 282 aaKnown RBP22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 NOL9Q5SY16 702 aaKnown RBP22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 MAD2L2Q9UI95 211 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 MTMR7Q9Y216 660 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 TMX2Q9Y320 296 aa22.01■■□□□ 1.11
PDLIM3-202ENST00000284770 SNHG28P0DPA3 235 aa22■■□□□ 1.11
PDLIM3-202ENST00000284770 IFNAR1P17181 557 aa22■■□□□ 1.11
PDLIM3-202ENST00000284770 IREB2P48200 963 aaKnown RBP22■■□□□ 1.11
PDLIM3-202ENST00000284770 MAP3K9P80192 1104 aa22■■□□□ 1.11
PDLIM3-202ENST00000284770 GMCL1P1Q8NEA9 526 aa22■■□□□ 1.11
PDLIM3-202ENST00000284770 PICK1Q9NRD5 415 aa22■■□□□ 1.11
PDLIM3-202ENST00000284770 PALM3A6NDB9 673 aaPredicted RBP21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 USP17L5A8MUK1 530 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 PARP1P09874 1014 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 ECE1P42892 770 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 TMTC3Q6ZXV5 915 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 ACER1Q8TDN7 264 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 ATAD5Q96QE3 1844 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 MYH4Q9Y623 1939 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 F5H6K3 240 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 TRAF5O00463 557 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 PTPRAP18433 802 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 GNAQP50148 359 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 KLRC3Q07444 240 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 PKP1Q13835 747 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 MAP3K11Q16584 847 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 USP17L2Q6R6M4 530 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 CCDC84Q86UT8 332 aaPredicted RBP21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 STAG2Q8N3U4 1231 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 DDX11Q96FC9 970 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 SH2D4AQ9H788 454 aa21.99■■□□□ 1.11
PDLIM3-202ENST00000284770 PPFIA3O75145 1194 aa21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 PLEKHA8P1O95397 391 aa21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 NUCB2P80303 420 aa21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 RASGRP2Q7LDG7 609 aa21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 CMTR1Q8N1G2 835 aaKnown RBP21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 DOCK1Q14185 1865 aa21.98■■□□□ 1.11
PDLIM3-202ENST00000284770 FDPSP14324 419 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 FUT2Q10981 343 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 ASPRV1Q53RT3 343 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 SLFN13Q68D06 897 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 NBPF11Q86T75 865 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 CCDC82Q8N4S0 544 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 PHKBQ93100 1093 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 LZTS2Q9BRK4 669 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 GPBP1L1Q9HC44 474 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 FMNL1O95466 1100 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 SSRP1Q08945 709 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 VGLL4Q14135 290 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 CHADLQ6NUI6 762 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 ARMC9Q7Z3E5 817 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 SRBD1Q8N5C6 995 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 FAM184AQ8NB25 1140 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 DCAF4Q8WV16 495 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 WDR18Q9BV38 432 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 AS3MTQ9HBK9 375 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 GOPCQ9HD26 462 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 ORC3Q9UBD5 711 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 CSADQ9Y600 493 aa21.97■■□□□ 1.11
PDLIM3-202ENST00000284770 KLRF2D3W0D1 207 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 RAD21O60216 631 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 NDUFB10O96000 172 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 GOLGA8HP0CJ92 632 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 FMR1Q06787 632 aaKnown RBP eCLIP21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 ZNF543Q08ER8 600 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 GPATCH4Q5T3I0 446 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 ANKRD13AQ8IZ07 590 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 GMCL1Q96IK5 515 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 ZDHHC9Q9Y397 364 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 KIF3AQ9Y496 699 aa21.96■■□□□ 1.11
PDLIM3-202ENST00000284770 STK36Q9NRP7 1315 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 SLC1A4P43007 532 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 TRIM22Q8IYM9 498 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 SLC26A6Q9BXS9 759 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 RNF26Q9BY78 433 aaPredicted RBP21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 VCPKMTQ9H867 229 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 SNCAIPQ9Y6H5 919 aa21.95■■□□□ 1.1
PDLIM3-202ENST00000284770 ZHX2Q9Y6X8 837 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms