RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 TNNT1P13805 278 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 BAG6P46379 1132 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 NLRP12P59046 1061 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 GRIK5Q16478 980 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 USH1GQ495M9 461 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 C12orf60Q5U649 245 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 TDRD7Q8NHU6 1098 aaKnown RBP10.21□□□□□ -0.78
SEC16A-201ENST00000277537 CNKSR1Q969H4 720 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 TMEM47Q9BQJ4 181 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 BMP2KQ9NSY1 1161 aaPredicted RBP10.21□□□□□ -0.78
SEC16A-201ENST00000277537 PRPF3O43395 683 aaKnown RBP10.21□□□□□ -0.78
SEC16A-201ENST00000277537 IPO7O95373 1038 aaKnown RBP10.21□□□□□ -0.78
SEC16A-201ENST00000277537 DDR1Q08345 913 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 KCTD1Q719H9 257 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 CERS3Q8IU89 383 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 TSC1Q92574 1164 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 RAB34Q9BZG1 259 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 GJA3Q9Y6H8 435 aa10.21□□□□□ -0.78
SEC16A-201ENST00000277537 GDF11O95390 407 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 SPICE1Q8N0Z3 855 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 ASIC1P78348 528 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 AOC3Q16853 763 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 COA7Q96BR5 231 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 EEF2KMTQ96G04 330 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 CEP95Q96GE4 821 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 PIGSQ96S52 555 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 COL14A1Q05707 1796 aaKnown RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 N4BP3O15049 544 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 KCNA4P22459 653 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 CASP1P29466 404 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 NONOQ15233 471 aaKnown RBP eCLIP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 SP8Q8IXZ3 490 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 REXO1Q8N1G1 1221 aaKnown RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 CCDC112Q8NEF3 446 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 NKX2-3Q8TAU0 364 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
SEC16A-201ENST00000277537 NFE2L3Q9Y4A8 694 aa10.2□□□□□ -0.78
SEC16A-201ENST00000277537 PHLPP1O60346 1717 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 PPP6R2O75170 966 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 DLGAP5Q15398 846 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 CERKLQ49MI3 558 aaPredicted RBP10.19□□□□□ -0.78
SEC16A-201ENST00000277537 FMR1NBQ8N0W7 255 aaPredicted RBP10.19□□□□□ -0.78
SEC16A-201ENST00000277537 EPS15P42566 896 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 FANCCQ00597 558 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 TMC4Q7Z404 712 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 DGKHQ86XP1 1220 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 CUL5Q93034 780 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 ATP6V0A2Q9Y487 856 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 COL18A1P39060 1754 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 ERCC3P19447 782 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 SMYD4Q8IYR2 804 aaPredicted RBP10.19□□□□□ -0.78
SEC16A-201ENST00000277537 TDRD3Q9H7E2 651 aaKnown RBP10.19□□□□□ -0.78
SEC16A-201ENST00000277537 DAGLAQ9Y4D2 1042 aa10.19□□□□□ -0.78
SEC16A-201ENST00000277537 FOXN1O15353 648 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 IGSF3O75054 1194 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 CBX1P83916 185 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 SHC4Q6S5L8 630 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 CRAMP1Q96RY5 1269 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 STRCQ7RTU9 1775 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 BCL9LQ86UU0 1499 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 USP17L5A8MUK1 530 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 POLD1P28340 1107 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 CCT6AP40227 531 aaKnown RBP10.18□□□□□ -0.78
SEC16A-201ENST00000277537 TECP42680 631 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 GSDMDP57764 484 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 KARSQ15046 597 aaKnown RBP10.18□□□□□ -0.78
SEC16A-201ENST00000277537 FANCLQ9NW38 375 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 ORC4O43929 436 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 CRKP46108 304 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 ADCY7P51828 1080 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 MRPL12P52815 198 aaKnown RBP10.18□□□□□ -0.78
SEC16A-201ENST00000277537 EZH2Q15910 746 aaKnown RBP10.18□□□□□ -0.78
SEC16A-201ENST00000277537 NUP88Q99567 741 aaPredicted RBP10.18□□□□□ -0.78
SEC16A-201ENST00000277537 PDCL3Q9H2J4 239 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
SEC16A-201ENST00000277537 ZBTB7AO95365 584 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 GRIN1Q05586 938 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 TROAPQ12815 778 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 NTRK3Q16288 839 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 USP49Q70CQ1 688 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 DEFB132Q7Z7B7 95 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 MNS1Q8NEH6 495 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 CSRNP1Q96S65 589 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 FLT1P17948 1338 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 ARFGEF2Q9Y6D5 1785 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 POLRMTO00411 1230 aaKnown RBP10.17□□□□□ -0.78
SEC16A-201ENST00000277537 ECE2O60344 883 aa10.17□□□□□ -0.78
SEC16A-201ENST00000277537 SNAP25P60880 206 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms