RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 SHISA4Q96DD7 197 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
TRIM23-202ENST00000274327 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 GMPSP49915 693 aaPredicted RBP16.81■□□□□ 0.28
TRIM23-202ENST00000274327 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
TRIM23-202ENST00000274327 MYSM1Q5VVJ2 828 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 USP28Q96RU2 1077 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 LZTS2Q9BRK4 669 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
TRIM23-202ENST00000274327 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
TRIM23-202ENST00000274327 PGAP2Q9UHJ9 254 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
TRIM23-202ENST00000274327 ZNF541Q9H0D2 1346 aa16.81■□□□□ 0.28
TRIM23-202ENST00000274327 MYO1BO43795 1136 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 SLC35G1Q2M3R5 365 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 NBPF9Q3BBW0 867 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 PFKFB3Q16875 520 aaPredicted RBP16.8■□□□□ 0.28
TRIM23-202ENST00000274327 ARHGAP27Q6ZUM4 889 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 ILDR2Q71H61 639 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
TRIM23-202ENST00000274327 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
TRIM23-202ENST00000274327 PARP1P09874 1014 aaKnown RBP16.79■□□□□ 0.28
TRIM23-202ENST00000274327 XBP1P17861 261 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 LMNB1P20700 586 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 SMARCA1P28370 1054 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
TRIM23-202ENST00000274327 RASGRP2Q7LDG7 609 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 SPZ1Q9BXG8 430 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 FOXP1Q9H334 677 aaPredicted RBP16.79■□□□□ 0.28
TRIM23-202ENST00000274327 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 CLIP2Q9UDT6 1046 aa16.79■□□□□ 0.28
TRIM23-202ENST00000274327 CYTH3O43739 400 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 PDHBP11177 359 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 SCG2P13521 617 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRIM23-202ENST00000274327 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 MICALL2Q8IY33 904 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 DIS3L2Q8IYB7 885 aaKnown RBP16.78■□□□□ 0.28
TRIM23-202ENST00000274327 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
TRIM23-202ENST00000274327 MKL1Q969V6 931 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRIM23-202ENST00000274327 VPS54Q9P1Q0 977 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
TRIM23-202ENST00000274327 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
TRIM23-202ENST00000274327 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 KLRF2D3W0D1 207 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 TBC1D12O60347 775 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 EGFRP00533 1210 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
TRIM23-202ENST00000274327 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
TRIM23-202ENST00000274327 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 KANSL2Q9H9L4 492 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 TMEM63CQ9P1W3 806 aa16.77■□□□□ 0.28
TRIM23-202ENST00000274327 FSD2A1L4K1 749 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 BTBD18B2RXH4 712 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.27
TRIM23-202ENST00000274327 ABCB5Q2M3G0 1257 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 PGBD1Q96JS3 809 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 TMEM39BQ9GZU3 492 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRIM23-202ENST00000274327 MTMR7Q9Y216 660 aa16.77■□□□□ 0.27
TRIM23-202ENST00000274327 GDF11O95390 407 aa16.76■□□□□ 0.27
TRIM23-202ENST00000274327 YEATS4O95619 227 aa16.76■□□□□ 0.27
TRIM23-202ENST00000274327 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
TRIM23-202ENST00000274327 GNL2Q13823 731 aaKnown RBP16.76■□□□□ 0.27
TRIM23-202ENST00000274327 SIAH1Q8IUQ4 282 aa16.76■□□□□ 0.27
TRIM23-202ENST00000274327 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
TRIM23-202ENST00000274327 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
TRIM23-202ENST00000274327 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
TRIM23-202ENST00000274327 TNNI2P48788 182 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 JAG1P78504 1218 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 CEBPZQ03701 1054 aaKnown RBP16.75■□□□□ 0.27
TRIM23-202ENST00000274327 SEPT2Q15019 361 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 NPY5RQ15761 445 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 RBM26Q5T8P6 1007 aaKnown RBP16.75■□□□□ 0.27
TRIM23-202ENST00000274327 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 KIF4BQ2VIQ3 1234 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
TRIM23-202ENST00000274327 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms