RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 KMT5BQ4FZB7 885 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.24
SPG11-201ENST00000261866 SERTAD1Q9UHV2 236 aa13.52□□□□□ -0.24
SPG11-201ENST00000261866 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.24
SPG11-201ENST00000261866 ZNF202O95125 648 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 CASC4Q6P4E1 433 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 PIK3C2GO75747 1445 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 PSMD6Q15008 389 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 C6orf163Q5TEZ5 329 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 VPS18Q9P253 973 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 ZFYVE16Q7Z3T8 1539 aa13.52□□□□□ -0.25
SPG11-201ENST00000261866 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 KLHL7Q8IXQ5 586 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 POLR2MP0CAP2 368 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 PDE6AP16499 860 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 CALCOCO2Q13137 446 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 EAF2Q96CJ1 260 aaPredicted RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 ME3Q16798 604 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 PI16Q6UXB8 463 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
SPG11-201ENST00000261866 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
SPG11-201ENST00000261866 PZPP20742 1482 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 SEPT10Q9P0V9 454 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 K7ENM7 598 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 SATB1Q01826 763 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 C4orf50Q6ZRC1 276 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 POSTNQ15063 836 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPG11-201ENST00000261866 METP08581 1390 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 ATP2A2P16615 1042 aaKnown RBP13.5□□□□□ -0.25
SPG11-201ENST00000261866 ABCB4P21439 1286 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 PNMA1Q8ND90 353 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
SPG11-201ENST00000261866 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 FAM193BQ96PV7 902 aaPredicted RBP13.5□□□□□ -0.25
SPG11-201ENST00000261866 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
SPG11-201ENST00000261866 ITKQ08881 620 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 KDRP35968 1356 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 TNKSO95271 1327 aa13.5□□□□□ -0.25
SPG11-201ENST00000261866 SLFN13Q68D06 897 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 CCT6BQ92526 530 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
SPG11-201ENST00000261866 M0R2C6 588 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 IGSF3O75054 1194 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 LIG4P49917 911 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 CCDC14Q49A88 953 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 LSM14BQ9BX40 385 aaKnown RBP13.49□□□□□ -0.25
SPG11-201ENST00000261866 FANCCQ00597 558 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 CLIC6Q96NY7 704 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 LRRIQ4A6NIV6 560 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 OTUD6AQ7L8S5 288 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 DDX12PQ92771 950 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 USP44Q9H0E7 712 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPG11-201ENST00000261866 ARPP19P56211 112 aa13.49□□□□□ -0.25
SPG11-201ENST00000261866 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
SPG11-201ENST00000261866 CUTAO60888 179 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 CNGA4Q8IV77 575 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 C21orf2O43822 256 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 CACNB3P54284 484 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 CNKSR1Q969H4 720 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 PRKAB2O43741 272 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 MTX1Q13505 466 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 DAAM2Q86T65 1068 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 CCDC127Q96BQ5 260 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 DKC1O60832 514 aaKnown RBP eCLIP13.48□□□□□ -0.25
SPG11-201ENST00000261866 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 RRAGAQ7L523 313 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 PLA2G4DQ86XP0 818 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 CYP2D7A0A087X1C5 515 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms