RNA–Protein interactions for RNA: ENST00000242261.5

TWIST1-201, Transcript of twist family bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWIST1, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-201ENST00000242261 CNTNAP1P78357 1384 aa32.55■■■□□ 2.8
TWIST1-201ENST00000242261 DICER1Q9UPY3 1922 aaKnown RBP32.54■■■□□ 2.8
TWIST1-201ENST00000242261 ZNF541Q9H0D2 1346 aa32.54■■■□□ 2.8
TWIST1-201ENST00000242261 UBE2Q2LH0YL09 131 aa32.54■■■□□ 2.8
TWIST1-201ENST00000242261 NBPF9Q3BBW0 867 aa32.54■■■□□ 2.8
TWIST1-201ENST00000242261 TFIP11Q9UBB9 837 aaKnown RBP32.54■■■□□ 2.8
TWIST1-201ENST00000242261 CLIP2Q9UDT6 1046 aa32.54■■■□□ 2.8
TWIST1-201ENST00000242261 CNOT7Q9UIV1 285 aaKnown RBP32.54■■■□□ 2.8
TWIST1-201ENST00000242261 ELP1O95163 1332 aa32.54■■■□□ 2.8
TWIST1-201ENST00000242261 UBE2HP62256 183 aa32.53■■■□□ 2.8
TWIST1-201ENST00000242261 TNFAIP1Q13829 316 aa32.53■■■□□ 2.8
TWIST1-201ENST00000242261 RBM26Q5T8P6 1007 aaKnown RBP32.53■■■□□ 2.8
TWIST1-201ENST00000242261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.53■■■□□ 2.8
TWIST1-201ENST00000242261 SHTN1A0MZ66 631 aa32.53■■■□□ 2.8
TWIST1-201ENST00000242261 PALM3A6NDB9 673 aaPredicted RBP32.53■■■□□ 2.8
TWIST1-201ENST00000242261 TMEM179Q6ZVK1 233 aa32.53■■■□□ 2.8
TWIST1-201ENST00000242261 MMP1P03956 469 aa32.52■■■□□ 2.8
TWIST1-201ENST00000242261 ABCB5Q2M3G0 1257 aa32.52■■■□□ 2.8
TWIST1-201ENST00000242261 GZF1Q9H116 711 aaPredicted RBP32.52■■■□□ 2.8
TWIST1-201ENST00000242261 KANSL2Q9H9L4 492 aa32.52■■■□□ 2.8
TWIST1-201ENST00000242261 SLURP2P0DP57 97 aa32.51■■■□□ 2.79
TWIST1-201ENST00000242261 PKN1Q16512 942 aa32.51■■■□□ 2.79
TWIST1-201ENST00000242261 LRRC47Q8N1G4 583 aaKnown RBP32.51■■■□□ 2.79
TWIST1-201ENST00000242261 STAG2Q8N3U4 1231 aa32.51■■■□□ 2.79
TWIST1-201ENST00000242261 GPT2Q8TD30 523 aa32.51■■■□□ 2.79
TWIST1-201ENST00000242261 CABP5Q9NP86 173 aa32.51■■■□□ 2.79
TWIST1-201ENST00000242261 H7C1D1 291 aa32.5■■■□□ 2.79
TWIST1-201ENST00000242261 ATP2B2Q01814 1243 aa32.5■■■□□ 2.79
TWIST1-201ENST00000242261 GADD45BO75293 160 aaPredicted RBP32.5■■■□□ 2.79
TWIST1-201ENST00000242261 GSE1Q14687 1217 aa32.5■■■□□ 2.79
TWIST1-201ENST00000242261 LEO1Q8WVC0 666 aaPredicted RBP32.5■■■□□ 2.79
TWIST1-201ENST00000242261 GOLGB1Q14789 3259 aaKnown RBP32.49■■■□□ 2.79
TWIST1-201ENST00000242261 KIF28PB7ZC32 967 aa32.49■■■□□ 2.79
TWIST1-201ENST00000242261 KLRF2D3W0D1 207 aa32.49■■■□□ 2.79
TWIST1-201ENST00000242261 SCG2P13521 617 aa32.49■■■□□ 2.79
TWIST1-201ENST00000242261 TMEM39BQ9GZU3 492 aa32.49■■■□□ 2.79
TWIST1-201ENST00000242261 hCG_1642624A0A1W2PR95 340 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 PFKFB3Q16875 520 aaPredicted RBP32.48■■■□□ 2.79
TWIST1-201ENST00000242261 KIF4BQ2VIQ3 1234 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 ASPRV1Q53RT3 343 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 CLEC10AQ8IUN9 316 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 GPC2Q8N158 579 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 NYAP2Q9P242 653 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 KCNJ14Q9UNX9 436 aa32.48■■■□□ 2.79
TWIST1-201ENST00000242261 GOLGA6L4A6NEF3 574 aa32.47■■■□□ 2.79
TWIST1-201ENST00000242261 U2AF2P26368 475 aaKnown RBP eCLIP32.47■■■□□ 2.79
TWIST1-201ENST00000242261 MYSM1Q5VVJ2 828 aa32.47■■■□□ 2.79
TWIST1-201ENST00000242261 DIS3L2Q8IYB7 885 aaKnown RBP32.47■■■□□ 2.79
TWIST1-201ENST00000242261 FOXP1Q9H334 677 aaPredicted RBP32.47■■■□□ 2.79
TWIST1-201ENST00000242261 BRMS1Q9HCU9 246 aa32.47■■■□□ 2.79
TWIST1-201ENST00000242261 VPS54Q9P1Q0 977 aa32.47■■■□□ 2.79
TWIST1-201ENST00000242261 MYH4Q9Y623 1939 aa32.47■■■□□ 2.79
TWIST1-201ENST00000242261 USP17L5A8MUK1 530 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 GDF11O95390 407 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 GOLGA8HP0CJ92 632 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 PDHBP11177 359 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SMARCA1P28370 1054 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 TBC1D10BQ4KMP7 808 aaPredicted RBP32.46■■■□□ 2.79
TWIST1-201ENST00000242261 USP17L2Q6R6M4 530 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SAMD7Q7Z3H4 446 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SPZ1Q9BXG8 430 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SBF1O95248 1867 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 TBC1D12O60347 775 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 CEBPZQ03701 1054 aaKnown RBP32.46■■■□□ 2.79
TWIST1-201ENST00000242261 ICA1Q05084 483 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 CAVIN1Q6NZI2 390 aaKnown RBP32.46■■■□□ 2.79
TWIST1-201ENST00000242261 PIBF1Q8WXW3 757 aa32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SYAP1Q96A49 352 aaPredicted RBP32.46■■■□□ 2.79
TWIST1-201ENST00000242261 SEPT2Q15019 361 aa32.45■■■□□ 2.79
TWIST1-201ENST00000242261 USP28Q96RU2 1077 aa32.45■■■□□ 2.79
TWIST1-201ENST00000242261 EGFRP00533 1210 aa32.44■■■□□ 2.78
TWIST1-201ENST00000242261 PHF20Q9BVI0 1012 aa32.44■■■□□ 2.78
TWIST1-201ENST00000242261 GH2P01242 217 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 EEF2P13639 858 aaKnown RBP32.43■■■□□ 2.78
TWIST1-201ENST00000242261 RASA3Q14644 834 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 NOSTRINQ8IVI9 506 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 MKL1Q969V6 931 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 RTEL1Q9NZ71 1219 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 SNHG28P0DPA3 235 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 KRT2P35908 639 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 SH3GLB2Q9NR46 395 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 RCOR1Q9UKL0 485 aa32.43■■■□□ 2.78
TWIST1-201ENST00000242261 BTBD18B2RXH4 712 aa32.42■■■□□ 2.78
TWIST1-201ENST00000242261 RRP36Q96EU6 259 aaKnown RBP32.42■■■□□ 2.78
TWIST1-201ENST00000242261 POLR3EQ9NVU0 708 aa32.42■■■□□ 2.78
TWIST1-201ENST00000242261 GPRC5DQ9NZD1 345 aa32.42■■■□□ 2.78
TWIST1-201ENST00000242261 RNF181Q9P0P0 153 aa32.42■■■□□ 2.78
TWIST1-201ENST00000242261 FRMPD2Q68DX3 1309 aaPredicted RBP32.41■■■□□ 2.78
TWIST1-201ENST00000242261 TPRNQ4KMQ1 711 aa32.41■■■□□ 2.78
TWIST1-201ENST00000242261 GPATCH4Q5T3I0 446 aaKnown RBP32.41■■■□□ 2.78
TWIST1-201ENST00000242261 RASGRP2Q7LDG7 609 aa32.41■■■□□ 2.78
TWIST1-201ENST00000242261 SEC63Q9UGP8 760 aaKnown RBP32.41■■■□□ 2.78
TWIST1-201ENST00000242261 HACL1Q9UJ83 578 aa32.41■■■□□ 2.78
TWIST1-201ENST00000242261 YBX3P16989 372 aaKnown RBP eCLIP32.4■■■□□ 2.78
TWIST1-201ENST00000242261 CCDC96Q2M329 555 aa32.4■■■□□ 2.78
TWIST1-201ENST00000242261 CYTH3O43739 400 aa32.4■■■□□ 2.78
TWIST1-201ENST00000242261 YEATS4O95619 227 aa32.4■■■□□ 2.78
TWIST1-201ENST00000242261 CALML3P27482 149 aa32.4■■■□□ 2.78
TWIST1-201ENST00000242261 NLRP5P59047 1200 aa32.4■■■□□ 2.78
TWIST1-201ENST00000242261 ZNF543Q08ER8 600 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms