RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MIGA2Q7L4E1 593 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 BAG1Q99933 345 aaPredicted RBP20.55■□□□□ 0.88
CLIP2-201ENST00000223398 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 USTQ9Y2C2 406 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 C21orf2O43822 256 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.88
CLIP2-201ENST00000223398 GPBP1Q86WP2 473 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 POSTNQ15063 836 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 PCDHB13Q9Y5F0 798 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 SYT10Q6XYQ8 523 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 KCTD1Q719H9 257 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
CLIP2-201ENST00000223398 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 MAGI2Q86UL8 1455 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 RHOXF2BP0C7M4 288 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 CYP2J2P51589 502 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 RHOXF2Q9BQY4 288 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 PCDHA1Q9Y5I3 950 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 SEMA3EO15041 775 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 NOX5Q96PH1 765 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 KDM5CP41229 1560 aa20.54■□□□□ 0.88
CLIP2-201ENST00000223398 NELFBQ8WX92 580 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 SERTAD1Q9UHV2 236 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 TLDC2A0PJX2 215 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 KCTD2Q14681 263 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 ARHGAP44Q17R89 818 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 LIN9Q5TKA1 542 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 MTUS1Q9ULD2 1270 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 ANKARQ7Z5J8 1434 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 ZBTB7AO95365 584 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 SUSD4Q5VX71 490 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 PLA2G4DQ86XP0 818 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 ABT1Q9ULW3 272 aaKnown RBP20.53■□□□□ 0.88
CLIP2-201ENST00000223398 PCDHA12Q9UN75 941 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 CLSTN2Q9H4D0 955 aa20.53■□□□□ 0.88
CLIP2-201ENST00000223398 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLIP2-201ENST00000223398 HEG1Q9ULI3 1381 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 MCF2L2Q86YR7 1114 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-201ENST00000223398 DIXDC1Q155Q3 683 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 PPP1R21Q6ZMI0 780 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 GADD45BO75293 160 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-201ENST00000223398 SCG2P13521 617 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 PNOCQ13519 176 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 FMNL3Q8IVF7 1028 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 KIF24Q5T7B8 1368 aa20.52■□□□□ 0.88
CLIP2-201ENST00000223398 SLC16A2P36021 539 aa20.52■□□□□ 0.87
CLIP2-201ENST00000223398 VWA3BQ502W6 1294 aa20.52■□□□□ 0.87
CLIP2-201ENST00000223398 CC2D2BQ6DHV5 1058 aa20.52■□□□□ 0.87
CLIP2-201ENST00000223398 NT5C3AQ9H0P0 336 aa20.52■□□□□ 0.87
CLIP2-201ENST00000223398 ZCCHC11Q5TAX3 1644 aaKnown RBP20.52■□□□□ 0.87
CLIP2-201ENST00000223398 SPATA31A3Q5VYP0 1347 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 E7EVH7 732 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 GTF2F1P35269 517 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLIP2-201ENST00000223398 SPECC1LQ69YQ0 1117 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 SELENOSQ9BQE4 189 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 DDX25Q9UHL0 483 aaKnown RBP20.51■□□□□ 0.87
CLIP2-201ENST00000223398 ATP7BP35670 1465 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 PRKAB2O43741 272 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 UBE3CQ15386 1083 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 CIAO1O76071 339 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 CYP4A11Q02928 519 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 DCUN1D2Q6PH85 259 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 HACE1Q8IYU2 909 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 FANCCQ00597 558 aa20.51■□□□□ 0.87
CLIP2-201ENST00000223398 M0R2C6 588 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 CALCOCO2Q13137 446 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 UAP1Q16222 522 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-201ENST00000223398 ZFP91Q96JP5 570 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-201ENST00000223398 ADGRL3Q9HAR2 1447 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 CHD1O14646 1710 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 Q3C1V9 767 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 NOSTRINQ8IVI9 506 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 MRRFQ96E11 262 aaKnown RBP20.5■□□□□ 0.87
CLIP2-201ENST00000223398 CTTNBP2NLQ9P2B4 639 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
CLIP2-201ENST00000223398 PPP2R5DQ14738 602 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 MICALCLQ6ZW33 695 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 NEK8Q86SG6 692 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 ZNF274Q96GC6 653 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-201ENST00000223398 FAM204AQ9H8W3 233 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 ARFGAP3Q9NP61 516 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
CLIP2-201ENST00000223398 MLKLQ8NB16 471 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 ABL1P00519 1130 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 TMC4Q7Z404 712 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 TEKT3Q9BXF9 490 aa20.49■□□□□ 0.87
CLIP2-201ENST00000223398 KDM2BQ8NHM5 1336 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms