RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TFAP4Q01664 338 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 SHC4Q6S5L8 630 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 FBXL16Q8N461 479 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 STAMQ92783 540 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 ADAMTS3O15072 1205 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 STX1AQ16623 288 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 AXDND1Q5T1B0 1012 aaPredicted RBP11.44□□□□□ -0.58
USP11-201ENST00000218348 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
USP11-201ENST00000218348 NOSTRINQ8IVI9 506 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 WNT7AO00755 349 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 CASP1P29466 404 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
USP11-201ENST00000218348 SLC39A14Q15043 492 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 TBC1D16Q8TBP0 767 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
USP11-201ENST00000218348 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 VAT1LQ9HCJ6 419 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 CLIP2Q9UDT6 1046 aa11.44□□□□□ -0.58
USP11-201ENST00000218348 RAD21O60216 631 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
USP11-201ENST00000218348 TOB1P50616 345 aaPredicted RBP11.43□□□□□ -0.58
USP11-201ENST00000218348 PLCD1P51178 756 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 SEC23AQ15436 765 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 ZNF174Q15697 407 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 PSMD1Q99460 953 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 ECM29Q5VYK3 1845 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 XDHP47989 1333 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 YEATS4O95619 227 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 GTF2IP78347 998 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 SMC2O95347 1197 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 MMP1P03956 469 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 LONRF3Q496Y0 759 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 GRIPAP1Q4V328 841 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 MFSD14BQ5SR56 506 aa11.43□□□□□ -0.58
USP11-201ENST00000218348 COBLO75128 1261 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 SCNN1DP51172 638 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 ZNF75DP51815 510 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CCDC144BQ3MJ40 725 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 TAF3Q5VWG9 929 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 MTERF4Q7Z6M4 381 aaKnown RBP11.42□□□□□ -0.58
USP11-201ENST00000218348 CLEC10AQ8IUN9 316 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 NOL10Q9BSC4 688 aaKnown RBP11.42□□□□□ -0.58
USP11-201ENST00000218348 ANO10Q9NW15 660 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 POLR2DO15514 142 aaKnown RBP11.42□□□□□ -0.58
USP11-201ENST00000218348 DEXIO95424 95 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CDC25AP30304 524 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 HOMER1Q86YM7 354 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 SRBD1Q8N5C6 995 aaKnown RBP11.42□□□□□ -0.58
USP11-201ENST00000218348 CNNM3Q8NE01 707 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
USP11-201ENST00000218348 PLCD4Q9BRC7 762 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 GGA1Q9UJY5 639 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 BTDP43251 543 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 AFMP43652 599 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP11-201ENST00000218348 IQCB1Q15051 598 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 PTPAQ15257 358 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 CD209Q9NNX6 404 aa11.42□□□□□ -0.58
USP11-201ENST00000218348 PDS5AQ29RF7 1337 aaKnown RBP11.41□□□□□ -0.58
USP11-201ENST00000218348 G3V3G9 751 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 PDE4BQ07343 736 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 HS1BP3Q53T59 392 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 MAP3K14Q99558 947 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 IL1R1P14778 569 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 NLRP5P59047 1200 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 RBM43Q6ZSC3 357 aaKnown RBP11.41□□□□□ -0.58
USP11-201ENST00000218348 TMTC2Q8N394 836 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 TMX1Q9H3N1 280 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
USP11-201ENST00000218348 IRF6O14896 467 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 CTAGE5O15320 804 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 TSPY3P0CV98 308 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 TSPY8P0CW00 308 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 ATP1A3P13637 1013 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 CMA1P23946 247 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 TROAPQ12815 778 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 PIK3AP1Q6ZUJ8 805 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 DHX40Q8IX18 779 aaKnown RBP11.4□□□□□ -0.58
USP11-201ENST00000218348 TEX11Q8IYF3 940 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
USP11-201ENST00000218348 WASF1Q92558 559 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms