RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 ANO6Q4KMQ2 910 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 NOSTRINQ8IVI9 506 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 BAZ2BQ9UIF8 2168 aaKnown RBP10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 GPR75-ASB3A0A0A6YYF3 556 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 MPHOSPH10O00566 681 aaKnown RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 MMP1P03956 469 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 BAG6P46379 1132 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 PPP4CP60510 307 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 ADALQ6DHV7 355 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 KIAA1524Q8TCG1 905 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 GOLPH3LQ9H4A5 285 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 MYH2Q9UKX2 1941 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 CACNA1SQ13698 1873 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 STK36Q9NRP7 1315 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 KLRG2A4D1S0 409 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 DDAH1O94760 285 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 C17orf53Q8N3J3 647 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 CNKSR1Q969H4 720 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 RNF26Q9BY78 433 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 VAT1LQ9HCJ6 419 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 DAGLAQ9Y4D2 1042 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 BECN2A8MW95 431 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 GOLGA6L19H0YKK7 550 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 TULP2O00295 520 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 CDK8P49336 464 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 EIF6P56537 245 aaKnown RBP10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 TCP10Q12799 353 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 DNAJC25Q9H1X3 360 aa10.18□□□□□ -0.78
MTHFD1-201ENST00000216605 CASZ1Q86V15 1759 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 FLT1P17948 1338 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 C21orf2O43822 256 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 GOLGA8HP0CJ92 632 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 NDUFA8P51970 172 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 TROAPQ12815 778 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 KCNQ5Q9NR82 932 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 CTAGE5O15320 804 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 KRT2P35908 639 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 CCDC178Q5BJE1 867 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 TMTC3Q6ZXV5 915 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 CLIC6Q96NY7 704 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 FEZ1Q99689 392 aa10.17□□□□□ -0.78
MTHFD1-201ENST00000216605 CHD4Q14839 1912 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 A0A087WWV3 80 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 BIN1O00499 593 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 ZNF165P49910 485 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 RCAN1P53805 252 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 CACNB3P54284 484 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 SLC39A14Q15043 492 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 AOC3Q16853 763 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 ISM2Q6H9L7 571 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 SRBD1Q8N5C6 995 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 PPIP5K2O43314 1243 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 PRPF3O43395 683 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 SYKP43405 635 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 NBPF9Q3BBW0 867 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 DGKHQ86XP1 1220 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 CERS5Q8N5B7 392 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 PDGFDQ9GZP0 370 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 CCDC88AQ3V6T2 1871 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 FAM205AQ6ZU69 1335 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 MAFGO15525 162 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 ECE2O60344 883 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 CCDC172P0C7W6 258 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 RILPL1Q5EBL4 403 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 HEATR3Q7Z4Q2 680 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 NCAPGQ9BPX3 1015 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 RGS17Q9UGC6 210 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 MRVI1Q9Y6F6 885 aa10.16□□□□□ -0.78
MTHFD1-201ENST00000216605 ZNF202O95125 648 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 FGRP09769 529 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 PFKFB1P16118 471 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 RASA1P20936 1047 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 U2AF2P26368 475 aaKnown RBP eCLIP10.15□□□□□ -0.786e-7■■■■□ 19.4
MTHFD1-201ENST00000216605 CT47A1Q5JQC4 288 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 STAG2Q8N3U4 1231 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 PDILTQ8N807 584 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 SPC24Q8NBT2 197 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 TMEM47Q9BQJ4 181 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 CALCOCO1Q9P1Z2 691 aa10.15□□□□□ -0.78
MTHFD1-201ENST00000216605 CEP131Q9UPN4 1083 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms