RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 TBC1D22AQ8WUA7 517 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 PUF60Q9UHX1 559 aaKnown RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 NFE2L3Q9Y4A8 694 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 ECE2O60344 883 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 ADRA2BP18089 450 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 ASIC1P78348 528 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 MYL5Q02045 173 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 RAD51AP2Q09MP3 1159 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
CHPF2-201ENST00000035307 PCDHAC2Q9Y5I4 1007 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 KRT2P35908 639 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 FBXO18Q8NFZ0 1043 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 BIN2Q9UBW5 565 aaPredicted RBP13.66□□□□□ -0.22
CHPF2-201ENST00000035307 SERTAD1Q9UHV2 236 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 KLRF2D3W0D1 207 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 DPEP1P16444 411 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 PPARDQ03181 441 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 GPR162Q16538 588 aa13.66□□□□□ -0.22
CHPF2-201ENST00000035307 CAVIN2O95810 425 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
CHPF2-201ENST00000035307 UBXN2AP68543 259 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 ELP1O95163 1332 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
CHPF2-201ENST00000035307 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
CHPF2-201ENST00000035307 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
CHPF2-201ENST00000035307 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 NEMFO60524 1076 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CALM1P0DP23 149 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CALM2P0DP24 149 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CALM3P0DP25 149 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 ANTXR2P58335 489 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 MCM6Q14566 821 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 PROM2Q8N271 834 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CCDC150Q8NCX0 1101 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 COA7Q96BR5 231 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 ZNF274Q96GC6 653 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 BCL9LQ86UU0 1499 aa13.64□□□□□ -0.23
CHPF2-201ENST00000035307 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CERKLQ49MI3 558 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 ENAHQ8N8S7 591 aaPredicted RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
CHPF2-201ENST00000035307 DEXIO95424 95 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 FGFR2P21802 821 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 CDK8P49336 464 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 CTNND2Q9UQB3 1225 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 CRKP46108 304 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 INF2Q27J81 1249 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 CAPZA3Q96KX2 299 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 ATP8A2Q9NTI2 1148 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 SERPINB13Q9UIV8 391 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 PHACTR2O75167 634 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 NFIAQ12857 509 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
CHPF2-201ENST00000035307 RESTQ13127 1097 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 ELF2Q15723 593 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 STAG2Q8N3U4 1231 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 FANCLQ9NW38 375 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 SAMM50Q9Y512 469 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
CHPF2-201ENST00000035307 CASP1P29466 404 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 TXKP42681 527 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 ADALQ6DHV7 355 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 CHMP2AO43633 222 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 CFBP00751 764 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHPF2-201ENST00000035307 CCDC40Q4G0X9 1142 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
CHPF2-201ENST00000035307 DALRD3Q5D0E6 543 aaKnown RBP13.62□□□□□ -0.23
CHPF2-201ENST00000035307 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms