RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Lonrf3Q9D4H7 753 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Cfap45Q9D9U9 551 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ano3A2AHL1 981 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ppef2O35385 757 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Stag2O35638 1231 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tnnt2P50752 301 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Scg2Q03517 617 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Spag5Q7TME2 1165 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Lrrc15Q80X72 579 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Necab1Q8BG18 352 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Dynll2Q9D0M5 89 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Klhl40Q9D783 621 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ulk4Q3V129 1303 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Serpina16D3Z660 418 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Gm5134E9QAB5 671 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Pola2P33611 600 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Uri1Q3TLD5 531 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tada3Q8R0L9 432 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Uba5Q8VE47 403 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Pcdha7Q91Y13 937 aa17.71■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tex13cD3YU32 604 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Aknad1E9Q8N6 675 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 NefhP19246 1090 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Gng11P61953 73 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Spg7Q3ULF4 781 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Fxr1Q61584 677 aaKnown RBP17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 IbspQ61711 324 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Arid3aQ62431 601 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Adam6bQ6IMH7 756 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 SelenooQ9DBC0 667 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Chd5A2A8L1 1946 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Plekhg2Q6KAU7 1340 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Slc9a1Q61165 820 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Cnnm4Q69ZF7 771 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Znf532Q6NXK2 1036 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Trak2Q6P9N8 913 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ggt6Q6PDE7 497 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Fchsd1Q6PFY1 688 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Txndc5Q91W90 417 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Dhx30Q99PU8 1217 aaKnown RBP17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mad2l2Q9D752 211 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Myh8P13542 1937 aa17.7■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Scgb2b18A0A087WPA9 112 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Palm3A2TJV2 734 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Olfr121Q5CZY0 321 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Myo19Q5SV80 963 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Tmem179Q8BHH9 233 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mical1Q8VDP3 1048 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Uchl5Q9WUP7 329 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Lamb1P02469 1786 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Sh3tc1G3X9F6 1346 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Rsph10bE9PYQ0 876 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Gm3893E9Q1I1 302 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Lmod3E9QA62 571 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Nr5a1P33242 462 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Nap1l2P51860 460 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ell2Q3UKU1 639 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 RragbQ6NTA4 374 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pspc1Q8R326 523 aaKnown RBP17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Rbm19Q8R3C6 952 aaKnown RBP17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pcdha12Q91Y18 950 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 RtcbQ99LF4 505 aaKnown RBP17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mtfr1lQ9CWE0 289 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Dydc2Q9D3X8 139 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Cd2apQ9JLQ0 637 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ubxn8Q9QZ49 277 aa17.69■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Zmym2Q9CU65 1376 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ltbp1Q8CG19 1712 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Samd1D3YXK1 519 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 GpiP06745 558 aaKnown RBP17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Rpusd2Q149F1 553 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Gucy2cQ3UWA6 1072 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Kif22Q3V300 660 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Lamb3Q61087 1168 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Trim25Q61510 634 aaKnown RBP17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 GypcQ78HU7 95 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Epha10Q8BYG9 1007 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Fam161bQ8CB59 589 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Apol10aQ8CCA5 318 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Fermt2Q8CIB5 680 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Nat10Q8K224 1024 aaKnown RBP17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Washc1Q8VDD8 475 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Mfap3lQ9D3X9 409 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Chaf1aQ9QWF0 911 aa17.68■□□□□ 0.42
Sdc1-205ENSMUST00000171158 MeiocA2AG06 965 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Btn2a2A4QPC6 514 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Abhd2Q9QXM0 425 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Togaram1Q6A070 1776 aaKnown RBP17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Pak1O88643 545 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Znf667Q2TL60 609 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ccdc51Q3URS9 406 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Smarca1Q6PGB8 1046 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Maats1Q8BRC6 783 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Ulbp1Q8HWA3 334 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Slfn1Q9Z0I7 337 aa17.67■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Aco1P28271 889 aaKnown RBP17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Traf1P39428 409 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Fam53cQ8BXQ8 393 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Myl6bQ8CI43 207 aa17.66■□□□□ 0.42
Sdc1-205ENSMUST00000171158 Afg3l2Q8JZQ2 802 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms