RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Serpinb6eI7HJI3 429 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Actn4P57780 912 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 YwhaeP62259 255 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Hace1Q3U0D9 909 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Lrrc36Q3V0M2 755 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Elf1Q60775 612 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 AqrQ8CFQ3 1481 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mybl2P48972 704 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ppp2r5eQ61151 467 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fndc3aQ8BX90 1198 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pfdn1Q9CWM4 122 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fbxo3Q9DC63 480 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 PapolbQ9WVP6 641 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Bach1P97302 739 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ankrd42Q3V096 527 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Rbm26Q6NZN0 1012 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ppp4r3aQ6P2K6 820 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pde5aQ8CG03 865 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gins4Q99LZ3 223 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pard3bQ9CSB4 1203 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 NfkbiaQ9Z1E3 314 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Trip13Q3UA06 432 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tbc1d9bQ5SVR0 1263 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ifit2Q64112 472 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Atg16l1Q8C0J2 607 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Arhgap18Q8K0Q5 663 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cttnbp2nlQ99LJ0 638 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Haus6Q6NV99 933 aaKnown RBP10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tmem60Q8K174 133 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 H2-OaQ9QWV1 250 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Trpc5Q9QX29 975 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Il16O54824 1322 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Caprin1Q60865 707 aaKnown RBP10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nacc1Q7TSZ8 514 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zfp418Q8BFS8 652 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 MtbpQ8BJS8 894 aaKnown RBP10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tmx3Q8BXZ1 456 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tmem143Q8VD26 458 aa10.21□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Dnajc25A2ALW5 357 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Q3UPC7 1272 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ccdc189Q6NZQ0 333 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Cct8l1Q80YT3 562 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ahi1Q8K3E5 1047 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Tom1l1Q923U0 474 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Trim8Q99PJ2 551 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ndufa8Q9DCJ5 172 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Sgk1Q9WVC6 431 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Deaf1Q9Z1T5 566 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gm7298A0A0N4SVU1 1476 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Slc27a3O88561 667 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Zfp781Q0P5U5 243 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gprasp2Q8BUY8 826 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Cyp2ab1S4R196 498 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Grin1P35438 938 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 RragaQ80X95 313 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Mettl5Q8K1A0 209 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Galnt15Q9D2N8 638 aa10.21□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Krt4P07744 525 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gpc4P51655 557 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Kpna2P52293 529 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 IntuQ059U7 942 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gm28047Q3US59 414 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Map3k10Q66L42 940 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 BrapQ99MP8 591 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Psma7Q9Z2U0 248 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gm43738A0A0G2JEA5 862 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Casp8O89110 480 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ccdc138Q0VF22 680 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 HomezQ80W88 542 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 SdsQ8VBT2 327 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Xrcc6P23475 608 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ccdc185Q3V118 621 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Clec4gQ8BNX1 294 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 PdclQ9DBX2 301 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Grin2bQ01097 1482 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Vti1aO89116 217 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Slc12a1P55014 1095 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Zc3h18Q0P678 948 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 SpertQ32MG2 446 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 HarsQ61035 509 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Sdf4Q61112 361 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Klhl29Q80T74 875 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Raph1F2Z3U3 1266 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 MthfslL7N466 203 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Stx3Q64704 289 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gpbp1Q6NXH3 473 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 D130040H23RikQ8BII3 405 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Lrrc2Q8VDB8 371 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Nip7Q9CXK8 180 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Sun1Q9D666 913 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Pde3aQ9Z0X4 1141 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Kifc3O35231 824 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Tubgcp3P58854 905 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Hsdl2Q2TPA8 490 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Hgh1Q8C3I8 393 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ufl1Q8CCJ3 793 aaKnown RBP10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Irak4Q8R4K2 459 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Gm30191A0A0U1RNT7 187 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Otud7bB2RUR8 840 aa10.2□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Dnm2P39054 870 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms