RNA–Protein interactions for RNA: ENSMUST00000163352.7

Ccdc58-202, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 970 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-202ENSMUST00000163352 Ccdc84Q4VA36 332 aaKnown RBP20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Recql4Q75NR7 1216 aaKnown RBP20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 9230110C19RikQ8CC70 267 aa20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Pspc1Q8R326 523 aaKnown RBP20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 RragcQ99K70 398 aa20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Pes1Q9EQ61 584 aaKnown RBP20.53■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Flot1O08917 428 aa20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Hoxc10P31257 342 aa20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Exosc10P56960 887 aaKnown RBP20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 GclcP97494 637 aa20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Ints3Q7TPD0 1041 aaKnown RBP20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Fez1Q8K0X8 392 aa20.52■□□□□ 0.88
Ccdc58-202ENSMUST00000163352 Disp2Q8CIP5 1345 aa20.52■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Copb2O55029 905 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Hoxd11P23813 323 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 CenpbP27790 599 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Rps6kb1Q8BSK8 525 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 HlcsQ920N2 722 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Cdca7lQ922M5 438 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Lonrf3Q9D4H7 753 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Sapcd2Q9D818 391 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Igsf9bE9PZ19 1328 aa20.51■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Zkscan16A2ALW2 728 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 LdhbP16125 334 aaKnown RBP20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Sap30bpQ02614 308 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Traf3ip1Q149C2 625 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Q3UK37 420 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Fndc3bQ6NWW9 1207 aaKnown RBP20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Kiaa1524Q8BWY9 907 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Serpinb13Q8CDC0 389 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Ccdc178Q8CDV0 866 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Plcg2Q8CIH5 1265 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Elp3Q9CZX0 547 aa20.5■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Ppp1r9aH3BJD6 1292 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 LdhaP06151 332 aaKnown RBP20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tph1P17532 447 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Hspa8P63017 646 aaKnown RBP20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Vgll2Q8BGW8 322 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Sp8Q8BMJ8 486 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 MyripQ8K3I4 856 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tceanc2Q8R2M0 207 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Gtf3c5Q8R2T8 520 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tmod4Q9JLH8 345 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Mkrn1Q9QXP6 481 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Suclg2Q9Z2I8 433 aa20.49■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Rnf216P58283 853 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 GabpaQ00422 454 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tmtc2Q56A06 836 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Kctd1Q5M956 257 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Ipo8Q7TMY7 1010 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Lca5Q80ST9 704 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Siglec10Q80ZE3 688 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Fbxo28Q8BIG4 368 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Pms1Q8K119 917 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 IrgqQ8VIM9 583 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Katnbl1Q9CWJ3 299 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Ccdc47Q9D024 483 aaKnown RBP20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Q9D9S1 216 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Znhit2Q9QY66 399 aa20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Zc3h4Q6ZPZ3 1304 aaKnown RBP20.48■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Calm1P0DP26 149 aaKnown RBP20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Calm2P0DP27 149 aaKnown RBP20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Calm3P0DP28 149 aaKnown RBP20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Morf4l1P60762 362 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Gjb2Q00977 226 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Filip1lQ6P6L0 1131 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Entpd3Q8BFW6 529 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Mrps27Q8BK72 415 aaKnown RBP20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Gimap7Q8R379 293 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Bco2Q99NF1 532 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 SerhlQ9EPB5 311 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Ralgps2Q9ERD6 590 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tjp3Q9QXY1 905 aa20.47■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tti2Q8BGV4 512 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Tcp11l1Q8BTG3 509 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Gprasp2Q8BUY8 826 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Morc2bQ8C5W4 1022 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Nr3c2Q8VII8 978 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 ArcQ9WV31 396 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Myh8P13542 1937 aa20.46■□□□□ 0.87
Ccdc58-202ENSMUST00000163352 Gm30191A0A0U1RNT7 187 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 OatP29758 439 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Mrgprb1Q3UG61 350 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Atp13a3Q5XF89 1219 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 H2-Q4Q8HWB2 354 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 DnerQ8JZM4 737 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Tdrd3Q91W18 743 aaKnown RBP20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Tmx2Q9D710 295 aaKnown RBP20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Cnpy3Q9DAU1 276 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 PatjQ63ZW7 1834 aa20.45■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Ripor3A1L3T7 938 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Celf5D3Z4T1 395 aaKnown RBP20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 OgdhlE9Q7L0 1029 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Me1P06801 572 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 1700013D24RikQ0P521 120 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Pdlim7Q3TJD7 457 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Specc1Q5SXY1 1067 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Ccp110Q7TSH4 1004 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 VmacQ8BP01 174 aa20.44■□□□□ 0.86
Ccdc58-202ENSMUST00000163352 Senp7Q8BUH8 1037 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms