RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Serpinb6Q60854 378 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tacc1Q6Y685 774 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Acnat2Q8BGG9 420 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rnf41Q8BH75 317 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Mtmr6Q8VE11 617 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 CactinQ9CS00 772 aaKnown RBP9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 RpainQ9CWY9 219 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nfu1Q9QZ23 255 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Grin2dQ03391 1323 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 InsrrQ9WTL4 1300 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gm15262A0A140LIQ5 728 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Myl3P09542 204 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ubxn2bQ0KL01 331 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nlrp4cQ3TKR3 982 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Skor1Q8BX46 964 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tubgcp2Q921G8 905 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tab2Q99K90 693 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tmem109Q3UBX0 243 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Baiap3Q80TT2 1134 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Vps37dQ810I0 261 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Olfm5Q8BU90 496 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 CgasQ8C6L5 507 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Slc5a4aQ9ET37 656 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 PigoQ9JJI6 1093 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ltb4r2Q9JJL9 360 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Myo3bQ1EG27 1305 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Armc3A2AU72 881 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ube3aO08759 870 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Usp5P56399 858 aaKnown RBP9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Vil1Q62468 827 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ift122Q6NWV3 1182 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ripor2Q80U16 1078 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ttc13A0A1L1SSC7 844 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Magea1O89006 320 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Magea5O89009 320 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Apba2P98084 750 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ncapg2Q6DFV1 1138 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 IarsQ8BU30 1262 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Trim29Q8R2Q0 587 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 AdarQ99MU3 1178 aaKnown RBP9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 4930550L24RikQ99PA7 320 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Stk32bQ9JJX8 414 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 AmfrQ9R049 643 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Magea2Q9R2A2 320 aa9.85□□□□□ -0.83
Col28a1-201ENSMUST00000115537 MypnQ5DTJ9 1315 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Zscan20B2KFW1 1030 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Prl7a2O54831 253 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Scp2P32020 547 aaKnown RBP9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nap1l2P51860 460 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ccdc42Q5SV66 316 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gtf3c6Q9D8P7 227 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ric8aQ3TIR3 530 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 GlmnQ8BZM1 596 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gle1Q8R322 699 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Arfgap2Q99K28 520 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Clip2Q9Z0H8 1047 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Adamtsl3G3UXC7 1706 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Sstr3P30935 428 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dpf2Q61103 391 aaKnown RBP9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cyp24a1Q64441 514 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Lrrcc1Q69ZB0 1026 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ankk1Q8BZ25 745 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cbx6Q9DBY5 414 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Trpc5Q9QX29 975 aa9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 AdnpQ9Z103 1108 aaKnown RBP9.84□□□□□ -0.83
Col28a1-201ENSMUST00000115537 GclcP97494 637 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Rbbp5Q8BX09 538 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Wdr60Q8C761 999 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lrrc45Q8CIM1 670 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 BaatQ91X34 420 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 4930519G04RikQ9CPT7 205 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Rsrc1Q9DBU6 334 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 1810065E05RikQ5NC41 235 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gigyf2Q6Y7W8 1291 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cnot6lQ8VEG6 555 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 PdhbQ9D051 359 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Efcc1Q9JJF6 558 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Myoz2Q9JJW5 264 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mtmr2Q9Z2D1 643 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Homer1Q9Z2Y3 366 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gm28919A0A087WP35 240 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ampd3O08739 766 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nrg3O35181 713 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 ErmnQ5EBJ4 281 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ccdc157Q5SPX1 718 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Naif1Q6PFD7 327 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gpr101Q80T62 511 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Vipas39Q8BGQ1 491 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pdzph1Q8BGR1 1238 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Stag1Q9D3E6 1258 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Polr2dQ9D7M8 142 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pip4k2aO70172 405 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Slc27a3O88561 667 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 En2P09066 324 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cct6aP80317 531 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gbp4Q61107 620 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tekt3Q6X6Z7 490 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ddx42Q810A7 929 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Telo2Q9DC40 840 aaKnown RBP9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lmbr1Q9JIT0 490 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms