RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Skap1Q3UUV5 355 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Lire1P11260 357 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Trim37Q6PCX9 961 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Impdh2P24547 514 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Scyl1Q9EQC5 806 aaKnown RBP20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Rasgrf2P70392 1189 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Slc7a6osQ7TPE5 306 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Rps6ka5Q8C050 863 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Tnpo2Q99LG2 887 aaKnown RBP20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Swi5Q8K3D3 89 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Cul3Q9JLV5 768 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 PpardP35396 440 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ccdc141E9Q8Q6 1531 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Synj1Q8CHC4 1574 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pex1Q5BL07 1284 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pip4k2cQ91XU3 421 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ttc41Q692V3 1318 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Angpt1O08538 498 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Osbpl5Q9ER64 874 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ccdc103Q9D9P2 237 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Nlrp4eQ66X19 978 aa20.09■□□□□ 0.81
Trim71-201ENSMUST00000111816 Akr1c19G3X9Y6 323 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Atg16l1Q8C0J2 607 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Zswim7Q9CWQ2 152 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Med10Q9CXU0 135 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 MefvQ9JJ26 767 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Atp12aQ9Z1W8 1035 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pnma5Q5DTT8 618 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Anapc4Q91W96 807 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Rnf14Q9JI90 485 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Lonrf2B2RT44 518 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Q3UPC7 1272 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gdap1l1Q8VE33 370 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ubxn11Q9D572 484 aa20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Eif3cQ8R1B4 911 aaKnown RBP20.08■□□□□ 0.81
Trim71-201ENSMUST00000111816 Map3k2Q61083 619 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Klhl7Q8BUL5 586 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Slc4a4O88343 1079 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gm28047Q3US59 414 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 MtbpQ8BJS8 894 aaKnown RBP20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Eif2b5Q8CHW4 717 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Grin1P35438 938 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Slc25a24Q8BMD8 475 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rrp15Q9CYX7 281 aaKnown RBP20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Myo1cQ9WTI7 1063 aa20.08■□□□□ 0.8
Trim71-201ENSMUST00000111816 Orc3Q9JK30 715 aaKnown RBP20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Mcf2A2AEU1 1111 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Adcy8P97490 1249 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Sugp2Q8CH09 1067 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Foxp3Q99JB6 429 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 ArhgdiaQ99PT1 204 aaKnown RBP20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 H2-OaQ9QWV1 250 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Psmd7P26516 321 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Atp11aP98197 1187 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ube2q2Q8K2Z8 378 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ubn2Q80WC1 1314 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rbm26Q6NZN0 1012 aaKnown RBP20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Nup107Q8BH74 926 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Spdl1Q923A2 608 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Gm43738A0A0G2JEA5 862 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Lzts3A2AHG0 700 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Larp6Q8BN59 492 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Spata17Q9D552 379 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Smarca4Q3TKT4 1613 aaKnown RBP20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cst12Q9DAN8 128 aa20.07■□□□□ 0.8
Trim71-201ENSMUST00000111816 Krt1P04104 637 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Myef2Q8C854 591 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cyth1Q9QX11 398 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rab14Q91V41 215 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rbm8a2A0A0N4SUH6 174 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 AW822073A0A0N4SUK1 652 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Casp2P29594 452 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Yipf3Q3UDR8 347 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Bst2Q8R2Q8 172 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Bmp2kQ91Z96 1138 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rbm8aQ9CWZ3 174 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cuedc2Q9CXX9 284 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Wbp11Q923D5 641 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Stk11Q9WTK7 436 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ascc3E9PZJ8 2198 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Mrpl12Q9DB15 201 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 NemfQ8CCP0 1064 aaKnown RBP20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Serpinb10Q8K1K6 397 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Rilpl1Q9JJC6 406 aa20.06■□□□□ 0.8
Trim71-201ENSMUST00000111816 Ppip5k1A2ARP1 1436 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tlk2O55047 718 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Cfap36Q8C6E0 343 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Traf7Q922B6 594 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 TnikP83510 1323 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 PsdQ5DTT2 1024 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 GancQ8BVW0 898 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Plcd1Q8R3B1 756 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 InhbaQ04998 424 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 IntuQ059U7 942 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Hace1Q3U0D9 909 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Tada3Q8R0L9 432 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Calr3Q9D9Q6 380 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Pbxip1Q3TVI8 727 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Serpinb3dQ6UKZ0 387 aa20.05■□□□□ 0.8
Trim71-201ENSMUST00000111816 Acsl3Q9CZW4 720 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms