RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Zfp42P22227 288 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kifap3P70188 793 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Top1Q04750 767 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ckap2Q3V1H1 664 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rbm12b2Q66JV4 834 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Edrf1Q6GQV7 1239 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sec24bQ80ZX0 1251 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Csrnp2Q8BGQ2 534 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 CerkQ8K4Q7 531 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mfap3Q922T2 349 aa9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 CactinQ9CS00 772 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Syf2Q9D198 242 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Hic2Q9JLZ6 619 aaKnown RBP9.27□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Siglec1Q62230 1695 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Col3a1P08121 1464 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tbc1d8bA3KGB4 1114 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Proca1B0QZF7 307 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rexo5D3YW29 759 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Casp12O08736 419 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cyp2d9P11714 504 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Krt86P97861 486 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Usp49Q6P9L4 685 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sdad1Q80UZ2 687 aaKnown RBP9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Spats2Q8K1N4 545 aaKnown RBP9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Itga2bQ9QUM0 1033 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pdcd6ipQ9WU78 869 aaKnown RBP9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ccne2Q9Z238 404 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 A0A0U1RNP2 1173 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 OatP29758 439 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ftl2P49945 183 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Zkscan8Q8BSL0 588 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rtn1Q8K0T0 780 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Q8K2W9 541 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Riok1Q922Q2 567 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Q9D1Z2 194 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 MajinQ9D992 256 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mast3Q3U214 1321 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cul4bA2A432 970 aaKnown RBP9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Dnajc21E9Q8D0 531 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Trove2O08848 538 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nat3P50296 290 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Atp8a2P98200 1148 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kiaa1468Q148V7 1216 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rnf40Q3U319 1001 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nlrp4fQ66X05 959 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ctdp1Q7TSG2 960 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Epn1Q80VP1 575 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Vipas39Q8BGQ1 491 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sfr1Q8BP27 319 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Slc5a1Q8C3K6 665 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 9230110C19RikQ8CC70 267 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 MyripQ8K3I4 856 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 PpanQ91YU8 470 aaKnown RBP9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Unc45aQ99KD5 944 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mkrn1Q9QXP6 481 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Kif9Q9WV04 790 aa9.26□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Myh7Q91Z83 1935 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm21698A0A087WQP8 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm21663A0A0G2JE01 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ppfia4B8QI36 1187 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm7361D3Z6R1 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 5031410I06RikE9Q4E0 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm5862K7N5V5 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gm10220K7N660 267 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 CtcfQ61164 736 aaKnown RBP9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 HrQ61645 1182 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tpp2Q64514 1262 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Rassf6Q80UQ2 353 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cc2d1bQ8BRN9 848 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 GphnQ8BUV3 769 aaKnown RBP9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 AbraQ8BUZ1 375 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Emilin1Q99K41 1017 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 AdarQ99MU3 1178 aaKnown RBP9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 ToporslQ9D2F8 683 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Thap2Q9D305 217 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fam217aQ9D9W6 419 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ube3bQ9ES34 1070 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Uchl5Q9WUP7 329 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 4932429P05RikA2ADI4 785 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Il7P10168 154 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 PparaP23204 468 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pla2g4eQ50L42 875 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nlrp9aQ66X03 949 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Adck2Q6NSR3 617 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Slc44a1Q6X893 653 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fnbp4Q6ZQ03 1031 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Apol10aQ8CCA5 318 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Taf6lQ8R2K4 616 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Mrfap1Q9CQL7 125 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ccdc130Q9D516 385 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nfu1Q9QZ23 255 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ank1Q02357 1862 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Snapc4Q8BP86 1333 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Col14a1Q80X19 1797 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 RcvrnP34057 202 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pfkfb2P70265 519 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Ccdc174Q3U155 467 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Olfr121Q5CZY0 321 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Il17raQ60943 864 aa9.25□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Lrrd1Q8C0R9 853 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms