RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gucy1a2F8VQK3 730 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Myl3P09542 204 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cct6aP80317 531 aaKnown RBP15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cyp24a1Q64441 514 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tacc1Q6Y685 774 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tubb2aQ7TMM9 445 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Slfnl1Q8BHW9 410 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Mtfr1lQ9CWE0 289 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tubb2bQ9CWF2 445 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Palm3A2TJV2 734 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gm21969J3QJZ1 289 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Lrrc4bP0C192 709 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cdh15P33146 784 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Top1Q04750 767 aaKnown RBP15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Atp8b1Q148W0 1251 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Tsr1Q5SWD9 803 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Olfm5Q8BU90 496 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Arhgef6Q8K4I3 771 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dbndd2Q9CRD4 158 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Popdc2Q9ES82 367 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Akap11E9Q777 1895 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Arhgap4B1AUY3 965 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Kifc2O08672 792 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Nmt2O70311 529 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Rad23bP54728 416 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Rnf40Q3U319 1001 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ccdc114Q3UX62 658 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cnga2Q62398 664 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Prpf40bQ80W14 870 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cct8l1Q80YT3 562 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cfap69Q8BH53 942 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Kif2bQ8C0N1 668 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Pus7lQ8CE46 702 aa15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Knop1Q9Z2Q2 478 aaKnown RBP15.14■□□□□ 0.01
Nup88-201ENSMUST00000035283 Prr16A3KMN5 304 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Prss40A6H6T1 365 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gm42641I6L9G2 585 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Igbp1Q61249 340 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Irak1Q62406 710 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Rnf41Q8BH75 317 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 AtripQ8BMG1 785 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Usp27Q8CEG8 438 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Arap2Q8BZ05 1703 aa15.13■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gnat2P50149 354 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Eif3j1Q3UGC7 261 aaKnown RBP15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Eif3j2Q66JS6 263 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dcaf5Q80T85 946 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Prpf3Q922U1 683 aaKnown RBP15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Bcl11bQ99PV8 884 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Hsd3b7Q9EQC1 369 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Abhd2Q9QXM0 425 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ppp2r3dQ9Z176 491 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Shank3Q4ACU6 1730 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gm4307E9PZY4 289 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gm5134E9QAB5 671 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Gm4312K9J7E2 289 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 MarcksP26645 309 aaKnown RBP15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cyp4f39Q8BGU0 532 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Stn1Q8K2X3 378 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Myo1hQ9D6A1 958 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Nrxn3Q6P9K9 1571 aa15.12■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dnajc21E9Q8D0 531 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 MthfslL7N466 203 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Nck2O55033 380 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Kifap3P70188 793 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 1700013D24RikQ0P521 120 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Olfr118Q7TRJ6 321 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Ttc26Q8BS45 554 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Amigo3Q8C2S7 508 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Vmn1r218Q8R261 298 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Scrn1Q9CZC8 414 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Greb1lB9EJV3 1913 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Snrpa1P57784 255 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Dynll1P63168 89 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Lrrn2Q6PHP6 730 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Pabpc4Q6PHQ9 660 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Bpifb6Q8BU51 449 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Leng8Q8CBY3 785 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Spata4Q8K3V1 295 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 LpxnQ99N69 386 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 RarsQ9D0I9 660 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Eif4enif1Q9EST3 983 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Trp53inp1Q9QXE4 239 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Znf609Q8BZ47 1413 aa15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 AfdnQ9QZQ1 1820 aaKnown RBP15.11■□□□□ 0.01
Nup88-201ENSMUST00000035283 Psmd14O35593 310 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Pla2g4aP47713 748 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Cct5P80316 541 aaKnown RBP15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 DSCC1Q14AI0 399 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Hdac4Q6NZM9 1076 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Adcy2Q80TL1 1090 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Tmem143Q8VD26 458 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Sar1bQ9CQC9 198 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Krtap5-3Q9D226 196 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Hdac6Q9Z2V5 1149 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Nav1Q8CH77 1875 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 MeiocA2AG06 965 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Tubb4bP68372 445 aaKnown RBP15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Znf496Q5SXI5 585 aa15.1■□□□□ 0.01
Nup88-201ENSMUST00000035283 Kif1bpQ6ZPU9 617 aa15.1■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 136 ms