RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Fam114a1Q9D281 569 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Aox3G3X982 1335 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Palm3A2TJV2 734 aa20.83■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Zfp597E9Q6S0 419 aa20.83■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ftl1P29391 183 aa20.83■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Olfr121Q5CZY0 321 aa20.83■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Phf20l1Q8CCJ9 1013 aa20.83■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Rad23aP54726 363 aa20.83■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Smarca1Q6PGB8 1046 aa20.83■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Atp1a2Q6PIE5 1020 aa20.83■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Epc1Q8C9X6 813 aa20.83■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ulk4Q3V129 1303 aa20.83■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ercc6lQ8BHK9 1240 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Dynll2Q9D0M5 89 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Klhl40Q9D783 621 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 PdclQ9DBX2 301 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pdcd6ipQ9WU78 869 aaKnown RBP20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Rbbp6P97868 1790 aaKnown RBP20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Kif2aP28740 705 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Nr5a1P33242 462 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 PcQ05920 1178 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ttll4Q80UG8 1193 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Zdhhc14Q8BQQ1 489 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Phc3Q8CHP6 981 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 McamQ8R2Y2 648 aaKnown RBP20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Lmbr1Q9JIT0 490 aa20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Marf1Q8BJ34 1730 aaKnown RBP20.82■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 MeiocA2AG06 965 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Krt86P97861 486 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 DSCC1Q14AI0 399 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gimap7Q8R379 293 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Dock5B2RY04 1868 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm5580A0A0N4SVP8 411 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm4307E9PZY4 289 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm4312K9J7E2 289 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Mdh1bQ5F204 500 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Hdac4Q6NZM9 1076 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Srp68Q8BMA6 625 aaKnown RBP20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Q8BT18 775 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Atp1a4Q9WV27 1032 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tpm4Q6IRU2 248 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Zswim4Q8C7B8 1101 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Fam161bQ8CB59 589 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pcdhgc5Q91XW9 944 aa20.81■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm21969J3QJZ1 289 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Npy5rO70342 466 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 GpiP06745 558 aaKnown RBP20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Chp1P61022 195 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Atp1b3P97370 278 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Madcam1Q61826 405 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ccp110Q7TSH4 1004 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Kctd3Q8BFX3 815 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Sf3b3Q921M3 1217 aaKnown RBP20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 LpxnQ99N69 386 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pfkfb3A7UAK5 555 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ppp2r5bQ6PD28 497 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gimap5Q8BWF2 308 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Stac3Q8BZ71 360 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 NelfbQ8C4Y3 580 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ndufv1Q91YT0 464 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ubxn8Q9QZ49 277 aa20.8■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 EvplQ9D952 2035 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 MthfslL7N466 203 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Traf3ip1Q149C2 625 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ildr1Q8CBR1 537 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pspc1Q8R326 523 aaKnown RBP20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ybx3Q9JKB3 361 aaKnown RBP20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pth1rP41593 591 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tmco3Q8BH01 678 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Copb1Q9JIF7 953 aa20.79■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm3409A0A0G2JE67 319 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Nkx2-5P42582 318 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Kcnj4P52189 445 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Ano2Q8CFW1 1002 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Bcl11bQ99PV8 884 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tube1Q9D6T1 475 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 AatfQ9JKX4 526 aaKnown RBP20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gm13023A2A8N2 498 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Btn2a2A4QPC6 514 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tbc1d2B1AVH7 922 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Apol7aB2RT54 418 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Slc9a1Q61165 820 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 GypcQ78HU7 95 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Adck5Q80V03 582 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Spice1Q8C804 860 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Fer1l6E0CZ42 1862 aa20.78■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pnpla6Q3TRM4 1355 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Cyp26c1B2RXA7 518 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Smarcc1P97496 1104 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Myo19Q5SV80 963 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Gimap8Q75N62 688 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Rasgrp4Q8BTM9 673 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Nat10Q8K224 1024 aaKnown RBP20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tmem39aQ9CYC3 486 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Slc39a2G3X943 309 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Scgb2b19J3QM75 112 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Pak1O88643 545 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Tpp1O89023 562 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Kcna1P16388 495 aa20.77■□□□□ 0.92
Ccdc3-201ENSMUST00000027988 Api5O35841 504 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms