RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Pak1O88643 545 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 PparaP23204 468 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cadps2Q8BYR5 1297 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Edc3Q8K2D3 508 aaKnown RBP11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ubac1Q8VDI7 409 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tnpo2Q99LG2 887 aaKnown RBP11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tgfb1i1Q62219 461 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cacna2d2Q6PHS9 1154 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Kif1bpQ6ZPU9 617 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rabep2Q91WG2 554 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Col1a2Q01149 1372 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Zfp804bA0A0G2JGH6 1343 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Arhgap4B1AUY3 965 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Zfpm1O35615 995 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tdo2P48776 406 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Atp2a3Q64518 1038 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 WaplQ65Z40 1200 aaKnown RBP11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 HhatQ8BMT9 499 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Parp10Q8CIE4 960 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 StrbpQ91WM1 672 aaKnown RBP11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 Abcb6Q9DC29 842 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 AglF8VPN4 1532 aa11.95□□□□□ -0.5
Ciita-201ENSMUST00000023147 RereQ80TZ9 1558 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Sos2Q02384 1333 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gm5934D3Z4U6 212 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gm10110D3Z5M2 615 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 ZfaP23607 742 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Dcaf17Q3TUL7 519 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gtpbp6Q3U6U5 514 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ubn1Q4G0F8 1135 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 NfkbibQ60778 359 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Zfp317Q8C0Q5 607 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Myl6bQ8CI43 207 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mrpl50Q8VDT9 159 aaKnown RBP11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ets1P27577 440 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Foxp1P58462 705 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Hspd1P63038 573 aaKnown RBP11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Kcna6Q61923 529 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Abtb2Q7TQI7 1024 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Csrnp2Q8BGQ2 534 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Stac3Q8BZ71 360 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 4930407I10RikD3Z5T8 1512 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mx1P09922 631 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Kif5aP33175 1027 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Elf1Q60775 612 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 KaznQ69ZS8 779 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ncoa7Q6DFV7 943 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Lonp1Q8CGK3 949 aaKnown RBP11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cd274Q9EP73 290 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Atp8a2P98200 1148 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Gm5168Q4KL04 211 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Sestd1Q80UK0 696 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Fgd5Q80UZ0 1219 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Spata16Q8C636 571 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pcdhb5Q91XZ5 792 aa11.94□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rabgap1A2AWA9 1064 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Psmb7P70195 277 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mybpc2Q5XKE0 1136 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rbbp5Q8BX09 538 aaKnown RBP11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Sar1bQ9CQC9 198 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 NapaQ9DB05 295 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rnaseh1O70338 285 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ccdc110Q3V125 848 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cdc37Q61081 379 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 TrhQ62361 256 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cnnm4Q69ZF7 771 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rsad2Q8CBB9 362 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Slc4a8Q8JZR6 1089 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ppp1r14cQ8R4S0 164 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Mei1Q9D4I2 1268 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 FibpQ9JI19 357 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Timm10P62073 90 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ift20Q61025 132 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Nucks1Q80XU3 234 aaKnown RBP11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tmx1Q8VBT0 278 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ndufab1Q9CR21 156 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ccdc70Q9D9B0 223 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 PdclQ9DBX2 301 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Clic4Q9QYB1 253 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Wdr17E9Q271 1322 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 CrklP47941 303 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Adora1Q60612 326 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 EsrrbQ61539 433 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Traf3ip3Q8C0G2 513 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Bst2Q8R2Q8 172 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Atp6v1e2Q9D593 226 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Pdzd4Q9QY39 772 aa11.93□□□□□ -0.5
Ciita-201ENSMUST00000023147 Prr16A3KMN5 304 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Cetn3O35648 167 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ftl1P29391 183 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 PcQ05920 1178 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Tmtc1Q3UV71 942 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 PicalmQ7M6Y3 660 aaKnown RBP11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Dzip3Q7TPV2 1204 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Stx12Q9ER00 274 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Krt90E9Q1Z0 538 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Ncf2O70145 525 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Rtel1Q0VGM9 1203 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 Nacc1Q7TSZ8 514 aa11.92□□□□□ -0.5
Ciita-201ENSMUST00000023147 ParnQ8VDG3 624 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms