RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Ankrd13cQ3UX43 541 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Mcm7Q61881 719 aaKnown RBP11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Prdm4Q80V63 803 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Fermt2Q8CIB5 680 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Arhgef6Q8K4I3 771 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Taf6lQ8R2K4 616 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Rrp1bQ91YK2 724 aaKnown RBP11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Dpf1Q9QX66 387 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Atp8b5A3FIN4 1183 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Usp53P15975 1069 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gpbp1Q6NXH3 473 aaKnown RBP11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tubb2aQ7TMM9 445 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Erlin1Q91X78 346 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tubb2bQ9CWF2 445 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Krtap5-3Q9D226 196 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 UvssaQ9D479 717 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tpcn1Q9EQJ0 817 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Znf704Q9ERQ3 566 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Trpm3Q5F4S9 1721 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tubb4bP68372 445 aaKnown RBP11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ccdc42Q5SV66 316 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ces3aQ63880 571 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Sox30Q8CGW4 782 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Myl6bQ8CI43 207 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Slc14a2Q8R4T9 930 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ces3bQ8VCU1 571 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Pkd2l2Q9JLG4 621 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ppp2r3dQ9Z176 491 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Arfgef2A2A5R2 1792 aa11.63□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Prr5lA2AVJ5 370 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gm1993A6X8I0 212 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 SlxD3Z347 212 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Speer4aF8VPX6 267 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Fam107bQ3TGF2 131 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Hdhd2Q3UGR5 259 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ccdc114Q3UX62 658 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Slc38a10Q5I012 1090 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Slfnl1Q8BHW9 410 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Rasgrp4Q8BTM9 673 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 NenfQ9CQ45 171 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Stag1Q9D3E6 1258 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Dydc1Q9D9T0 175 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Myo1cQ9WTI7 1063 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gucy1a2F8VQK3 730 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Capn2O08529 700 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Pth1rP41593 591 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Fam83bQ0VBM2 1012 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Susd4Q8BH32 490 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 QarsQ8BML9 775 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Klc3Q91W40 508 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 PpanQ91YU8 470 aaKnown RBP11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Foxo3Q9WVH4 672 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cul9Q80TT8 1865 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Usp5P56399 858 aaKnown RBP11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tubb5P99024 444 aaKnown RBP11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Hdgfl1Q2VPR5 283 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Lrrfip1Q3UZ39 729 aaKnown RBP11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ckap2Q3V1H1 664 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tbx2Q60707 711 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gngt1Q61012 74 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Nid2O88322 1403 aa11.62□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Rsrc2A2RTL5 376 aaKnown RBP11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 ErmardE9Q048 622 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 ChkbO55229 394 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 HmmrQ00547 794 aaKnown RBP11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Zfp781Q0P5U5 243 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Usp50Q6P8X6 390 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ppp2r5bQ6PD28 497 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Fam161bQ8CB59 589 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Pex3Q9QXY9 372 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Dnm2P39054 870 aaKnown RBP11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Stat5bP42232 786 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cadps2Q8BYR5 1297 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cd274Q9EP73 290 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cnbd1B1AWM0 430 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cyp2c23E9Q5K4 494 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tuft1O08970 390 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Rnf40Q3U319 1001 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ppp1r7Q3UM45 361 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Dnph1Q80VJ3 173 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Lrsam1Q80ZI6 727 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Ccdc172Q810N9 267 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Sgpp1Q9JI99 430 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gpaa1Q9WTK3 621 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Zfand4D3Z3C6 739 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Skap2Q3UND0 358 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Spata4Q8K3V1 295 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Sirt2Q8VDQ8 389 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Prpf3Q922U1 683 aaKnown RBP11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Clip2Q9Z0H8 1047 aa11.61□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Tpp1O89023 562 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Cdh15P33146 784 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Rbm15bQ6PHZ5 887 aaKnown RBP11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Nme8Q715T0 586 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Gimap8Q75N62 688 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Sept9Q80UG5 583 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Dact1Q8R4A3 778 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Atp1a1Q8VDN2 1023 aaKnown RBP11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 CltaO08585 235 aa11.6□□□□□ -0.55
Echdc1-201ENSMUST00000020034 Q3TYL0 343 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms