RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Kif1bpQ6ZPU9 617 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Triml1Q8BVP1 470 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Rasal3Q8C2K5 1041 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Nod2Q8K3Z0 1020 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Pcdha7Q91Y13 937 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Lonrf3Q9D4H7 753 aa18.6■□□□□ 0.57
Shh-201ENSMUST00000002708 Rps8P62242 208 aaKnown RBP18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Nup133Q8R0G9 1155 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Dact1Q8R4A3 778 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Tpm3-rs7D3Z2H9 248 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Pola2P33611 600 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Rad23aP54726 363 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Adck5Q80V03 582 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Phc3Q8CHP6 981 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Stn1Q8K2X3 378 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Prpf3Q922U1 683 aaKnown RBP18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 1700018B08RikQ9DA83 213 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Aox3G3X982 1335 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Arfgef1G3X9K3 1846 aaKnown RBP18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Mum1l1Q4VA55 681 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Dnph1Q80VJ3 173 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Anks1bQ8BIZ1 1259 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Sde2Q8K1J5 448 aaKnown RBP18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 Hip1rQ9JKY5 1068 aa18.59■□□□□ 0.57
Shh-201ENSMUST00000002708 C4bP01029 1738 aa18.58■□□□□ 0.57
Shh-201ENSMUST00000002708 Cul4bA2A432 970 aaKnown RBP18.58■□□□□ 0.57
Shh-201ENSMUST00000002708 Mdh1P14152 334 aa18.58■□□□□ 0.57
Shh-201ENSMUST00000002708 Ctnna3Q65CL1 895 aa18.58■□□□□ 0.57
Shh-201ENSMUST00000002708 Ctdp1Q7TSG2 960 aa18.58■□□□□ 0.57
Shh-201ENSMUST00000002708 Adgra3Q7TT36 1310 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Zfand4D3Z3C6 739 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Stx8O88983 236 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Tdo2P48776 406 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Evi5P97366 809 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Krt86P97861 486 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 TxlnaQ6PAM1 554 aaKnown RBP18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Ccdc57Q6PHN1 1016 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Snd1Q78PY7 910 aaKnown RBP18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Gpt2Q8BGT5 522 aa18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Eif4enif1Q9EST3 983 aaKnown RBP18.58■□□□□ 0.56
Shh-201ENSMUST00000002708 Gm36210A0A1B0GS00 229 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Calcoco2A2A6M5 331 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Exoc3l2D3YUP5 789 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Map9Q3TRR0 646 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Lrrc43Q3V0L5 667 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Krtap5-3Q9D226 196 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Rai14Q9EP71 979 aaKnown RBP18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Dpf1Q9QX66 387 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Dock5B2RY04 1868 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Gm7347D3YYI9 267 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Speer4aF8VPX6 267 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Traf3ip1Q149C2 625 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 LbrQ3U9G9 626 aaKnown RBP18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Ppp2r5bQ6PD28 497 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Nat10Q8K224 1024 aaKnown RBP18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 DonsonQ9QXP4 560 aa18.57■□□□□ 0.56
Shh-201ENSMUST00000002708 Pth1rP41593 591 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Hpcal4Q8BGZ1 191 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Rbm19Q8R3C6 952 aaKnown RBP18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Slc14a2Q8R4T9 930 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Adarb2Q9JI20 745 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Cbx8Q9QXV1 362 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 GakQ99KY4 1305 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Scgb2b18A0A087WPA9 112 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Usp53P15975 1069 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Il15P48346 162 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Lrriq3Q14DL3 633 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 FntaQ61239 377 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Ccp110Q7TSH4 1004 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Ttll4Q80UG8 1193 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Map3k11Q80XI6 850 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Bicdl2Q8CHW5 507 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 RarsQ9D0I9 660 aaKnown RBP18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Mfap3lQ9D3X9 409 aa18.56■□□□□ 0.56
Shh-201ENSMUST00000002708 Peak1Q69Z38 1735 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Tom1O88746 492 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Kiaa1468Q148V7 1216 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Ell2Q3UKU1 639 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Gm5592Q3V0A6 857 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Sval3Q76I99 144 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Tas2r124Q7M718 309 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Apol10aQ8CCA5 318 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Vps53Q8CCB4 832 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 HmcesQ8R1M0 353 aaKnown RBP18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Ccdc88aQ5SNZ0 1873 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Rfc1P35601 1131 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Pbx1P41778 430 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Klhl40Q9D783 621 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Map3k15A2AQW0 1331 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Calm1P0DP26 149 aaKnown RBP18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Calm2P0DP27 149 aaKnown RBP18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Calm3P0DP28 149 aaKnown RBP18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 RargP18911 458 aaKnown RBP18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Chp1P61022 195 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Cep128Q8BI22 1102 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Efcab8Q8C9R9 203 aa18.55■□□□□ 0.56
Shh-201ENSMUST00000002708 Duox1A2AQ92 1551 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Rad23bP54728 416 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Sgsm1Q8BPQ7 1093 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Lmbr1Q9JIT0 490 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms