RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A RPH1P39956 796 aa8.2□□□□□ -1.1
TGA1tA(UGC)A TES1P41903 349 aaKnown RBP8.2□□□□□ -1.1
TGA1tA(UGC)A TAH11P47112 604 aa8.2□□□□□ -1.1
TGA1tA(UGC)A SAP4P53036 818 aa8.2□□□□□ -1.1
TGA1tA(UGC)A RPL22BP56628 122 aaKnown RBP8.2□□□□□ -1.1
TGA1tA(UGC)A MCP2Q06567 569 aa8.2□□□□□ -1.1
TGA1tA(UGC)A HBT1Q07653 1046 aaKnown RBP8.2□□□□□ -1.1
TGA1tA(UGC)A ZRT2Q12436 422 aa8.2□□□□□ -1.1
TGA1tA(UGC)A RMD5Q12508 421 aa8.2□□□□□ -1.1
TGA1tA(UGC)A COX3P00420 269 aa8.19□□□□□ -1.1
TGA1tA(UGC)A SUC2P00724 532 aa8.19□□□□□ -1.1
TGA1tA(UGC)A INH1P01097 85 aa8.19□□□□□ -1.1
TGA1tA(UGC)A GLN4P13188 809 aaKnown RBP8.19□□□□□ -1.1
TGA1tA(UGC)A YSP3P25036 478 aa8.19□□□□□ -1.1
TGA1tA(UGC)A GID7P25569 745 aa8.19□□□□□ -1.1
TGA1tA(UGC)A HEM12P32347 362 aaPredicted RBP8.19□□□□□ -1.1
TGA1tA(UGC)A SCC4P40090 624 aa8.19□□□□□ -1.1
TGA1tA(UGC)A YJL070CP40361 888 aa8.19□□□□□ -1.1
TGA1tA(UGC)A DPH1P40487 425 aaKnown RBP8.19□□□□□ -1.1
TGA1tA(UGC)A CSN12P47130 423 aa8.19□□□□□ -1.1
TGA1tA(UGC)A SWS2P53937 143 aa8.19□□□□□ -1.1
TGA1tA(UGC)A RLI1Q03195 608 aaKnown RBP8.19□□□□□ -1.1
TGA1tA(UGC)A VTI1Q04338 217 aa8.19□□□□□ -1.1
TGA1tA(UGC)A CDC73Q06697 393 aa8.19□□□□□ -1.1
TGA1tA(UGC)A ATG10Q07879 167 aa8.19□□□□□ -1.1
TGA1tA(UGC)A RMP1Q12530 201 aa8.19□□□□□ -1.1
TGA1tA(UGC)A PRP9P19736 530 aaKnown RBP8.18□□□□□ -1.1
TGA1tA(UGC)A UBA1P22515 1024 aaKnown RBP8.18□□□□□ -1.1
TGA1tA(UGC)A CDC20P26309 610 aa8.18□□□□□ -1.1
TGA1tA(UGC)A SLD2P34252 453 aa8.18□□□□□ -1.1
TGA1tA(UGC)A PBP2P38151 413 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
TGA1tA(UGC)A YBP1P38315 674 aa8.18□□□□□ -1.1
TGA1tA(UGC)A VHC1P38329 1120 aa8.18□□□□□ -1.1
TGA1tA(UGC)A MAD1P40957 749 aa8.18□□□□□ -1.1
TGA1tA(UGC)A FRE4P53746 719 aa8.18□□□□□ -1.1
TGA1tA(UGC)A YNL143CP53908 130 aa8.18□□□□□ -1.1
TGA1tA(UGC)A RSC4Q02206 625 aa8.18□□□□□ -1.1
TGA1tA(UGC)A TRM82Q03774 444 aa8.18□□□□□ -1.1
TGA1tA(UGC)A ESC2Q06340 456 aa8.18□□□□□ -1.1
TGA1tA(UGC)A GCR1P07261 785 aa8.17□□□□□ -1.1
TGA1tA(UGC)A INO1P11986 533 aa8.17□□□□□ -1.1
TGA1tA(UGC)A PEP5P12868 1029 aa8.17□□□□□ -1.1
TGA1tA(UGC)A RDS2P19541 446 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A RFA2P26754 273 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A TPS2P31688 896 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A IMP3P32899 183 aaPredicted RBP8.17□□□□□ -1.1
TGA1tA(UGC)A TFA2P36145 328 aa8.17□□□□□ -1.1
TGA1tA(UGC)A LDB7P38210 180 aa8.17□□□□□ -1.1
TGA1tA(UGC)A IML3P38265 245 aa8.17□□□□□ -1.1
TGA1tA(UGC)A POP4P38336 279 aa8.17□□□□□ -1.1
TGA1tA(UGC)A MSR1P38714 643 aa8.17□□□□□ -1.1
TGA1tA(UGC)A LRP1P38801 184 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A SEO1P39709 593 aa8.17□□□□□ -1.1
TGA1tA(UGC)A NDC80P40460 691 aa8.17□□□□□ -1.1
TGA1tA(UGC)A YPS6P40583 537 aa8.17□□□□□ -1.1
TGA1tA(UGC)A SWC4P53201 476 aa8.17□□□□□ -1.1
TGA1tA(UGC)A UTP6Q02354 440 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A OPT2Q06593 877 aa8.17□□□□□ -1.1
TGA1tA(UGC)A RTT10Q08924 1013 aa8.17□□□□□ -1.1
TGA1tA(UGC)A HOS1Q12214 470 aa8.17□□□□□ -1.1
TGA1tA(UGC)A BRR2P32639 2163 aaKnown RBP8.17□□□□□ -1.1
TGA1tA(UGC)A SMF2P38778 549 aa8.16□□□□□ -1.1
TGA1tA(UGC)A YIL108WP40483 696 aaKnown RBP8.16□□□□□ -1.1
TGA1tA(UGC)A SUN4P53616 420 aa8.16□□□□□ -1.1
TGA1tA(UGC)A YFT2Q06676 274 aa8.16□□□□□ -1.1
TGA1tA(UGC)A YDL129WQ07555 291 aa8.16□□□□□ -1.1
TGA1tA(UGC)A BUD20Q08004 166 aaPredicted RBP8.16□□□□□ -1.1
TGA1tA(UGC)A ACM1Q08981 209 aa8.16□□□□□ -1.1
TGA1tA(UGC)A SMF3Q12078 473 aaPredicted RBP8.16□□□□□ -1.1
TGA1tA(UGC)A GCN1P33892 2672 aaKnown RBP8.16□□□□□ -1.1
TGA1tA(UGC)A YKR104WP0CE69 306 aa8.15□□□□□ -1.1
TGA1tA(UGC)A ERG6P25087 383 aaKnown RBP8.15□□□□□ -1.1
TGA1tA(UGC)A MRPL9P31334 269 aa8.15□□□□□ -1.1
TGA1tA(UGC)A SPS19P32573 292 aaKnown RBP8.15□□□□□ -1.1
TGA1tA(UGC)A YEL043WP32618 956 aa8.15□□□□□ -1.1
TGA1tA(UGC)A CTF13P35203 478 aa8.15□□□□□ -1.1
TGA1tA(UGC)A SRP72P38688 640 aaKnown RBP8.15□□□□□ -1.1
TGA1tA(UGC)A DBP8P38719 431 aa8.15□□□□□ -1.1
TGA1tA(UGC)A CCT6P39079 546 aa8.15□□□□□ -1.1
TGA1tA(UGC)A YNL320WP42840 284 aa8.15□□□□□ -1.1
TGA1tA(UGC)A YFL012WP43580 148 aa8.15□□□□□ -1.1
TGA1tA(UGC)A CIA1Q05583 330 aa8.15□□□□□ -1.1
TGA1tA(UGC)A CUE5Q08412 411 aaKnown RBP8.15□□□□□ -1.1
TGA1tA(UGC)A VPS68Q12016 184 aa8.15□□□□□ -1.1
TGA1tA(UGC)A STT4P37297 1900 aa8.14□□□□□ -1.11
TGA1tA(UGC)A TUB1P09733 447 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A SBP1P10080 294 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A POL30P15873 258 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A APA1P16550 321 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A CBF1P17106 351 aa8.14□□□□□ -1.11
TGA1tA(UGC)A SNT1P25357 1226 aa8.14□□□□□ -1.11
TGA1tA(UGC)A MGT1P26188 188 aa8.14□□□□□ -1.11
TGA1tA(UGC)A DPB3P27344 201 aa8.14□□□□□ -1.11
TGA1tA(UGC)A NDI1P32340 513 aa8.14□□□□□ -1.11
TGA1tA(UGC)A PLC1P32383 869 aa8.14□□□□□ -1.11
TGA1tA(UGC)A TFC3P34111 1160 aa8.14□□□□□ -1.11
TGA1tA(UGC)A KES1P35844 434 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A UBP14P38237 781 aaKnown RBP8.14□□□□□ -1.11
TGA1tA(UGC)A FAA3P39002 694 aa8.14□□□□□ -1.11
TGA1tA(UGC)A MEF2P39677 819 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms