RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B YOL159CQ08300 171 aa0.86□□□□□ -2.27
snR39BsnR39B FRE3Q08905 711 aa0.86□□□□□ -2.27
snR39BsnR39B MRP2P10663 115 aaPredicted RBP0.85□□□□□ -2.27
snR39BsnR39B POL3P15436 1097 aa0.85□□□□□ -2.27
snR39BsnR39B GLN3P18494 730 aa0.85□□□□□ -2.27
snR39BsnR39B PDE1P22434 369 aa0.85□□□□□ -2.27
snR39BsnR39B PRP45P28004 379 aaPredicted RBP0.85□□□□□ -2.27
snR39BsnR39B PDR3P33200 976 aa0.85□□□□□ -2.27
snR39BsnR39B DID4P36108 232 aa0.85□□□□□ -2.27
snR39BsnR39B SRP68P38687 599 aaKnown RBP0.85□□□□□ -2.27
snR39BsnR39B ERC1P38767 581 aa0.85□□□□□ -2.27
snR39BsnR39B PEA2P40091 420 aa0.85□□□□□ -2.27
snR39BsnR39B YJL213WP40896 331 aa0.85□□□□□ -2.27
snR39BsnR39B GSM1P42950 618 aa0.85□□□□□ -2.27
snR39BsnR39B BTN2P53286 410 aa0.85□□□□□ -2.27
snR39BsnR39B ATP12P22135 325 aa0.84□□□□□ -2.27
snR39BsnR39B ARG1P22768 420 aa0.84□□□□□ -2.27
snR39BsnR39B LAC1P28496 418 aa0.84□□□□□ -2.27
snR39BsnR39B STB5P38699 743 aa0.84□□□□□ -2.27
snR39BsnR39B GZF3P42944 551 aaKnown RBP0.84□□□□□ -2.27
snR39BsnR39B YGL081WP53156 320 aa0.84□□□□□ -2.27
snR39BsnR39B TFB2Q02939 513 aa0.84□□□□□ -2.27
snR39BsnR39B ARP10Q04549 284 aa0.84□□□□□ -2.27
snR39BsnR39B YLR049CQ12110 428 aa0.84□□□□□ -2.27
snR39BsnR39B HOS1Q12214 470 aa0.84□□□□□ -2.27
snR39BsnR39B PRP19P32523 503 aaKnown RBP0.83□□□□□ -2.28
snR39BsnR39B PPG1P32838 368 aa0.83□□□□□ -2.28
snR39BsnR39B UBX6P47049 396 aa0.83□□□□□ -2.28
snR39BsnR39B ASK10P48361 1146 aa0.83□□□□□ -2.28
snR39BsnR39B RNR4P49723 345 aaKnown RBP0.83□□□□□ -2.28
snR39BsnR39B SDA1P53313 767 aaKnown RBP0.83□□□□□ -2.28
snR39BsnR39B IGO1P53897 168 aa0.83□□□□□ -2.28
snR39BsnR39B NGL1Q08213 363 aaKnown RBP0.83□□□□□ -2.28
snR39BsnR39B YOL098CQ12496 1037 aa0.83□□□□□ -2.28
snR39BsnR39B YBR255C-AQ3E776 120 aa0.83□□□□□ -2.28
snR39BsnR39B YER145C-AA0A023PYF4 145 aa0.82□□□□□ -2.28
snR39BsnR39B URA3P03962 267 aa0.82□□□□□ -2.28
snR39BsnR39B SUP35P05453 685 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B CTT1P06115 562 aa0.82□□□□□ -2.28
snR39BsnR39B GPA1P08539 472 aa0.82□□□□□ -2.28
snR39BsnR39B SUI3P09064 285 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B MRS3P10566 314 aa0.82□□□□□ -2.28
snR39BsnR39B SPR1P32603 445 aa0.82□□□□□ -2.28
snR39BsnR39B SER1P33330 395 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B TYS1P36421 394 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B FUN12P39730 1002 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B PHM8P40025 321 aa0.82□□□□□ -2.28
snR39BsnR39B IRC5P43610 853 aa0.82□□□□□ -2.28
snR39BsnR39B MNN11P46985 422 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B NNF1P47149 201 aa0.82□□□□□ -2.28
snR39BsnR39B MNT2P53059 558 aa0.82□□□□□ -2.28
snR39BsnR39B MAK10Q02197 733 aa0.82□□□□□ -2.28
snR39BsnR39B CRF1Q04930 467 aa0.82□□□□□ -2.28
snR39BsnR39B HCR1Q05775 265 aaKnown RBP0.82□□□□□ -2.28
snR39BsnR39B YLR455WQ06188 304 aa0.82□□□□□ -2.28
snR39BsnR39B YOR378WQ08902 515 aa0.82□□□□□ -2.28
snR39BsnR39B NOP56Q12460 504 aaKnown RBP RIP-Chip data0.82□□□□□ -2.28not detected
snR39BsnR39B YDL012CQ12489 107 aa0.82□□□□□ -2.28
snR39BsnR39B GID7P25569 745 aa0.81□□□□□ -2.28
snR39BsnR39B PRE2P30656 287 aaKnown RBP0.81□□□□□ -2.28
snR39BsnR39B PET309P32522 965 aaPredicted RBP0.81□□□□□ -2.28
snR39BsnR39B SSP120P39931 234 aaKnown RBP0.81□□□□□ -2.28
snR39BsnR39B RGI2P40188 164 aa0.81□□□□□ -2.28
snR39BsnR39B NPA3P47122 385 aa0.81□□□□□ -2.28
snR39BsnR39B EKI1Q03764 534 aa0.81□□□□□ -2.28
snR39BsnR39B ERP1Q05359 219 aaKnown RBP0.81□□□□□ -2.28
snR39BsnR39B MHR1Q06630 226 aa0.81□□□□□ -2.28
snR39BsnR39B AAD4Q07747 329 aa0.81□□□□□ -2.28
snR39BsnR39B YEH2Q07950 538 aa0.81□□□□□ -2.28
snR39BsnR39B TMC1Q08422 150 aaPredicted RBP0.81□□□□□ -2.28
snR39BsnR39B AGA1P32323 725 aa0.8□□□□□ -2.28
snR39BsnR39B YKL091CP33324 310 aaKnown RBP0.8□□□□□ -2.28
snR39BsnR39B TIF5P38431 405 aaKnown RBP0.8□□□□□ -2.28
snR39BsnR39B RPH1P39956 796 aa0.8□□□□□ -2.28
snR39BsnR39B VFA1P40080 203 aa0.8□□□□□ -2.28
snR39BsnR39B MAD2P40958 196 aa0.8□□□□□ -2.28
snR39BsnR39B IDP2P41939 412 aa0.8□□□□□ -2.28
snR39BsnR39B FET5P43561 622 aa0.8□□□□□ -2.28
snR39BsnR39B COS10P52924 374 aa0.8□□□□□ -2.28
snR39BsnR39B YLR152CP54072 576 aa0.8□□□□□ -2.28
snR39BsnR39B ASI1P54074 624 aa0.8□□□□□ -2.28
snR39BsnR39B MTQ2Q03920 221 aaPredicted RBP0.8□□□□□ -2.28
snR39BsnR39B TAF7Q05021 590 aa0.8□□□□□ -2.28
snR39BsnR39B YTM1Q12024 460 aaPredicted RBP0.8□□□□□ -2.28
snR39BsnR39B RTK1Q12100 620 aaPredicted RBP0.8□□□□□ -2.28
snR39BsnR39B SET6Q12529 373 aa0.8□□□□□ -2.28
snR39BsnR39B FAB1P34756 2278 aa0.79□□□□□ -2.28
snR39BsnR39B RPL15AP05748 204 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B MTF1P14908 341 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B RPL8AP17076 256 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B MCK1P21965 375 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B SGF29P25554 259 aa0.79□□□□□ -2.28
snR39BsnR39B ERG1P32476 496 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B YNK1P36010 153 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B AGP2P38090 596 aa0.79□□□□□ -2.28
snR39BsnR39B ERG7P38604 731 aa0.79□□□□□ -2.28
snR39BsnR39B SEC31P38968 1273 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B ARB1P40024 610 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B IKS1P47042 667 aa0.79□□□□□ -2.28
snR39BsnR39B YGL082WP53155 381 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms