RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W POL31P46957 487 aa1.59□□□□□ -2.15
SGF11YPL047W YGL081WP53156 320 aa1.59□□□□□ -2.15
SGF11YPL047W YNL234WP53857 426 aa1.59□□□□□ -2.15
SGF11YPL047W YNL034WP53963 612 aa1.59□□□□□ -2.15
SGF11YPL047W TRI1Q05024 226 aa1.59□□□□□ -2.15
SGF11YPL047W DBP10Q12389 995 aaKnown RBP1.59□□□□□ -2.15
SGF11YPL047W YBR255C-AQ3E776 120 aa1.59□□□□□ -2.15
SGF11YPL047W YBR298C-AQ8TGK4 73 aa1.59□□□□□ -2.15
SGF11YPL047W SUI3P09064 285 aaKnown RBP1.58□□□□□ -2.16
SGF11YPL047W MRP2P10663 115 aaPredicted RBP1.58□□□□□ -2.16
SGF11YPL047W BAR1P12630 587 aa1.58□□□□□ -2.16
SGF11YPL047W MGR1P25573 417 aa1.58□□□□□ -2.16
SGF11YPL047W MSH1P25846 959 aa1.58□□□□□ -2.16
SGF11YPL047W RIM2P38127 377 aa1.58□□□□□ -2.16
SGF11YPL047W SLX1P38324 304 aa1.58□□□□□ -2.16
SGF11YPL047W YJR061WP40355 935 aa1.58□□□□□ -2.16
SGF11YPL047W MKT1P40850 830 aaKnown RBP1.58□□□□□ -2.16
SGF11YPL047W SHE10P53075 577 aa1.58□□□□□ -2.16
SGF11YPL047W SMA1Q02651 245 aa1.58□□□□□ -2.16
SGF11YPL047W ADD37Q03233 198 aa1.58□□□□□ -2.16
SGF11YPL047W VPS64Q03944 604 aa1.58□□□□□ -2.16
SGF11YPL047W YDR415CQ04033 374 aaPredicted RBP1.58□□□□□ -2.16
SGF11YPL047W YDR109CQ04585 715 aa1.58□□□□□ -2.16
SGF11YPL047W UTP21Q06078 939 aaPredicted RBP1.58□□□□□ -2.16
SGF11YPL047W DAP1Q12091 152 aa1.58□□□□□ -2.16
SGF11YPL047W YLR049CQ12110 428 aa1.58□□□□□ -2.16
SGF11YPL047W PSF3Q12146 194 aa1.58□□□□□ -2.16
SGF11YPL047W GPA1P08539 472 aa1.57□□□□□ -2.16
SGF11YPL047W CBS2P14905 389 aa1.57□□□□□ -2.16
SGF11YPL047W BUD14P27637 709 aa1.57□□□□□ -2.16
SGF11YPL047W HES1P35843 434 aa1.57□□□□□ -2.16
SGF11YPL047W TAF5P38129 798 aa1.57□□□□□ -2.16
SGF11YPL047W NMD2P38798 1089 aaKnown RBP1.57□□□□□ -2.16
SGF11YPL047W YHR218WP38899 603 aa1.57□□□□□ -2.16
SGF11YPL047W EMP65P40085 556 aa1.57□□□□□ -2.16
SGF11YPL047W ECM38Q05902 660 aaPredicted RBP1.57□□□□□ -2.16
SGF11YPL047W PPT2Q12036 173 aa1.57□□□□□ -2.16
SGF11YPL047W PDR3P33200 976 aa1.56□□□□□ -2.16
SGF11YPL047W TIF3P34167 436 aaKnown RBP1.56□□□□□ -2.16
SGF11YPL047W MRPL4P36517 319 aa1.56□□□□□ -2.16
SGF11YPL047W YPK3P38070 525 aa1.56□□□□□ -2.16
SGF11YPL047W NIT2P47016 307 aa1.56□□□□□ -2.16
SGF11YPL047W YJR142WP47173 342 aa1.56□□□□□ -2.16
SGF11YPL047W ESF2P53743 316 aaKnown RBP1.56□□□□□ -2.16
SGF11YPL047W MCP2Q06567 569 aa1.56□□□□□ -2.16
SGF11YPL047W AIM6Q07716 390 aa1.56□□□□□ -2.16
SGF11YPL047W PSR2Q07949 397 aa1.56□□□□□ -2.16
SGF11YPL047W YGR161W-CQ3E744 92 aa1.56□□□□□ -2.16
SGF11YPL047W YER145C-AA0A023PYF4 145 aa1.55□□□□□ -2.16
SGF11YPL047W VAS1P07806 1104 aaKnown RBP1.55□□□□□ -2.16
SGF11YPL047W TGL1P34163 548 aa1.55□□□□□ -2.16
SGF11YPL047W YIR014WP40570 242 aa1.55□□□□□ -2.16
SGF11YPL047W YGR079WP53249 370 aa1.55□□□□□ -2.16
SGF11YPL047W RSF1Q05043 376 aa1.55□□□□□ -2.16
SGF11YPL047W CRD1Q07560 283 aa1.55□□□□□ -2.16
SGF11YPL047W TLG2Q08144 397 aa1.55□□□□□ -2.16
SGF11YPL047W PEX15Q08215 383 aa1.55□□□□□ -2.16
SGF11YPL047W BSC1Q12140 328 aa1.55□□□□□ -2.16
SGF11YPL047W RVB2Q12464 471 aaKnown RBP1.55□□□□□ -2.16
SGF11YPL047W KAR1P11927 433 aa1.54□□□□□ -2.16
SGF11YPL047W PGI1P12709 554 aaKnown RBP1.54□□□□□ -2.16
SGF11YPL047W HEM12P32347 362 aaPredicted RBP1.54□□□□□ -2.16
SGF11YPL047W SWH1P35845 1188 aa1.54□□□□□ -2.16
SGF11YPL047W AVT5P38176 459 aa1.54□□□□□ -2.16
SGF11YPL047W PCA1P38360 1216 aa1.54□□□□□ -2.16
SGF11YPL047W LEU5P38702 357 aa1.54□□□□□ -2.16
SGF11YPL047W YEL068CP39977 110 aa1.54□□□□□ -2.16
SGF11YPL047W SCS2P40075 244 aaKnown RBP1.54□□□□□ -2.16
SGF11YPL047W IAH1P41734 238 aa1.54□□□□□ -2.16
SGF11YPL047W CTL1Q03220 320 aaKnown RBP1.54□□□□□ -2.16
SGF11YPL047W YLR455WQ06188 304 aa1.54□□□□□ -2.16
SGF11YPL047W TRE2Q08693 809 aa1.54□□□□□ -2.16
SGF11YPL047W PHO3P24031 467 aa1.53□□□□□ -2.16
SGF11YPL047W LDB16P25587 256 aa1.53□□□□□ -2.16
SGF11YPL047W SDS22P36047 338 aa1.53□□□□□ -2.16
SGF11YPL047W RRT2P38332 387 aa1.53□□□□□ -2.16
SGF11YPL047W YLF2P38746 405 aa1.53□□□□□ -2.16
SGF11YPL047W FPR3P38911 411 aaKnown RBP1.53□□□□□ -2.16
SGF11YPL047W PUS4P48567 403 aaKnown RBP1.53□□□□□ -2.16
SGF11YPL047W YPL108WQ02872 168 aaPredicted RBP1.53□□□□□ -2.16
SGF11YPL047W ARP10Q04549 284 aa1.53□□□□□ -2.16
SGF11YPL047W AAD4Q07747 329 aa1.53□□□□□ -2.16
SGF11YPL047W BSC6Q08280 497 aa1.53□□□□□ -2.16
SGF11YPL047W CSR2Q12734 1121 aa1.53□□□□□ -2.16
SGF11YPL047W GLN3P18494 730 aa1.52□□□□□ -2.17
SGF11YPL047W MDM31P38880 579 aa1.52□□□□□ -2.17
SGF11YPL047W PHM8P40025 321 aa1.52□□□□□ -2.17
SGF11YPL047W MSY1P48527 492 aa1.52□□□□□ -2.17
SGF11YPL047W SGF73P53165 657 aa1.52□□□□□ -2.17
SGF11YPL047W YMR178WQ03219 274 aaKnown RBP1.52□□□□□ -2.17
SGF11YPL047W PFA5Q03289 374 aa1.52□□□□□ -2.17
SGF11YPL047W EKI1Q03764 534 aa1.52□□□□□ -2.17
SGF11YPL047W NUR1Q12066 484 aa1.52□□□□□ -2.17
SGF11YPL047W SLX4Q12098 748 aa1.52□□□□□ -2.17
SGF11YPL047W LSB5P25369 354 aa1.51□□□□□ -2.17
SGF11YPL047W RTS1P38903 757 aa1.51□□□□□ -2.17
SGF11YPL047W SAW1P39735 261 aa1.51□□□□□ -2.17
SGF11YPL047W YJL068CP40363 299 aa1.51□□□□□ -2.17
SGF11YPL047W RTS2P40962 232 aa1.51□□□□□ -2.17
SGF11YPL047W SPG5P42933 373 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms