RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	HOG1	P32485	435 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	SKN1	P33336	771 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	OAF3	P36023	863 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	CUE1	P38428	203 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	MCM22	P47167	239 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	AAD10	P47182	288 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	CSI1	Q04368	295 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	RCO1	Q04779	684 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	HRD1	Q08109	551 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	ESA1	Q08649	445 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	YDL007C-A	Q2V2Q0	85 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	VCX1	Q99385	411 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	HAP4	P14064	554 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	TAL1	P15019	335 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	YAP1	P19880	650 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	ARO7	P32178	256 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	ISC10	P32645	267 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	NGR1	P32831	672 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	ASK1	P35734	292 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	MRPL4	P36517	319 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	CCT4	P39078	528 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	SEN34	P39707	275 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	FET5	P43561	622 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	NIT2	P47016	307 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	BNA2	P47125	453 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	FAA4	P47912	694 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	YNL134C	P53912	376 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	SEC5	P89102	971 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	TIM44	Q01852	431 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PNG1	Q02890	363 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	CSN9	Q03981	162 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	SSK22	P25390	1331 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	TRP3	P00937	484 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	LEU2	P04173	364 aa	Predicted RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	CLN1	P20437	546 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	IRE1	P32361	1115 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	LYP1	P32487	611 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PET127	P32606	800 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	TSA1	P34760	196 aa	Known RBP	4.1	□□□□□ -1.75
SNF2	YOR290C	SPT10	P35208	640 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	UBP11	P36026	717 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	ORC6	P38826	435 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	YHR210C	P38893	341 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	CAB2	P40506	365 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	LYS14	P40971	790 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	GCV2	P49095	1034 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	PEX25	Q02969	394 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	MUB1	Q03162	620 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	NSE5	Q03718	556 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	MRX10	Q05648	414 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	TIP41	Q12199	356 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	YIL002W-A	Q3E7Z5	69 aa		4.1	□□□□□ -1.75
SNF2	YOR290C	RAD6	P06104	172 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	GAL2	P13181	574 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	GCN3	P14741	305 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	PDC5	P16467	563 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	CNA1	P23287	553 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	APL2	P36000	726 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	TUL1	P36096	758 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	FTH1	P38310	465 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YHR219W	P38900	624 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	SUR2	P38992	349 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	FLC2	P39719	783 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	LSM5	P40089	93 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	LAS21	P40367	830 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	PEX21	P50091	288 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	RRP46	P53256	223 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	YGR168C	P53293	376 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	RNH70	P53331	553 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	RAD30	Q04049	632 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	TAF11	Q04226	346 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YLR225C	Q05948	407 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	GPN3	Q06543	272 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YFH1	Q07540	174 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	NIP7	Q08962	181 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	VAM3	Q12241	283 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YCL001W-B	Q96VH2	84 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	CET1	O13297	549 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	PUP3	P25451	205 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	TIR2	P33890	251 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	DHR2	P36009	735 aa	Predicted RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	NAT2	P37293	288 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	EAF5	P39995	279 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	IRC22	P40006	225 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	ADO1	P47143	340 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	GDE1	Q02979	1223 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	ELC1	Q03071	99 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YMR210W	Q03649	449 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	SUB2	Q07478	446 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	RSB1	Q08417	382 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YBL113C	Q7M4S9	792 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	PRC1	P00729	532 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	GCN4	P03069	281 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	ATP7	P30902	174 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	YPT52	P36018	234 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	RBG1	P39729	369 aa		4.09	□□□□□ -1.75
SNF2	YOR290C	PFK26	P40433	827 aa	Known RBP	4.09	□□□□□ -1.75
SNF2	YOR290C	PCI8	P40512	444 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms