RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	PRM1	P53835	661 aa		12.83	□□□□□ -0.36
LSM3	YLR438C-A	IPI3	P53877	555 aa		12.83	□□□□□ -0.36
LSM3	YLR438C-A	BUD20	Q08004	166 aa	Predicted RBP	12.83	□□□□□ -0.36
LSM3	YLR438C-A	IRC10	Q08118	586 aa		12.83	□□□□□ -0.36
LSM3	YLR438C-A	ERG20	P08524	352 aa	Known RBP	12.82	□□□□□ -0.36
LSM3	YLR438C-A	INO1	P11986	533 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	PMA2	P19657	947 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	FPR1	P20081	114 aa	Known RBP	12.82	□□□□□ -0.36
LSM3	YLR438C-A	RMD8	P43620	662 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	CSN12	P47130	423 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	YNR061C	P53747	219 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	YDR109C	Q04585	715 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	CDC123	Q05791	360 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	YOR223W	Q12015	292 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	PER33	Q12144	273 aa		12.82	□□□□□ -0.36
LSM3	YLR438C-A	SSC1	P0CS90	654 aa	Known RBP	12.81	□□□□□ -0.36
LSM3	YLR438C-A	EMC1	P25574	760 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	GUT1	P32190	709 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	AEP1	P32493	518 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	DSF2	P38213	736 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	SSP120	P39931	234 aa	Known RBP	12.81	□□□□□ -0.36
LSM3	YLR438C-A	CTK3	P46963	296 aa	Predicted RBP	12.81	□□□□□ -0.36
LSM3	YLR438C-A	SPC105	P53148	917 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	SLT2	Q00772	484 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	PET117	Q02771	107 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	SLD7	Q08457	257 aa		12.81	□□□□□ -0.36
LSM3	YLR438C-A	LEU1	P07264	779 aa	Known RBP	12.8	□□□□□ -0.36
LSM3	YLR438C-A	YJU3	P28321	313 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	KIP2	P28743	706 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	HRR25	P29295	494 aa	Known RBP	12.8	□□□□□ -0.36
LSM3	YLR438C-A	IMP3	P32899	183 aa	Predicted RBP	12.8	□□□□□ -0.36
LSM3	YLR438C-A	ARH1	P48360	493 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	MNT2	P53059	558 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	NMA2	P53204	395 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	PEX8	P53248	589 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	RPL34A	P87262	121 aa	Predicted RBP	12.8	□□□□□ -0.36
LSM3	YLR438C-A	BUD22	Q04347	519 aa	Known RBP	12.8	□□□□□ -0.36
LSM3	YLR438C-A	RSC2	Q06488	889 aa		12.8	□□□□□ -0.36
LSM3	YLR438C-A	NSP1	P14907	823 aa	Known RBP	12.79	□□□□□ -0.36
LSM3	YLR438C-A	SRV2	P17555	526 aa	Known RBP	12.79	□□□□□ -0.36
LSM3	YLR438C-A	RIM1	P32445	135 aa	Known RBP	12.79	□□□□□ -0.36
LSM3	YLR438C-A	SEO1	P39709	593 aa		12.79	□□□□□ -0.36
LSM3	YLR438C-A	YMR178W	Q03219	274 aa	Known RBP	12.79	□□□□□ -0.36
LSM3	YLR438C-A	PPN1	Q04119	674 aa		12.79	□□□□□ -0.36
LSM3	YLR438C-A	FAR8	Q05040	523 aa		12.79	□□□□□ -0.36
LSM3	YLR438C-A	YPR084W	Q06821	456 aa		12.79	□□□□□ -0.36
LSM3	YLR438C-A	BEM1	P29366	551 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	GDA1	P32621	518 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	SCD5	P34758	872 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	TOM20	P35180	183 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	SQT1	P35184	431 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	ALY1	P36117	915 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	SET3	P36124	751 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	CIN4	P39110	191 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	YJL206C	P39529	758 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	LSC1	P53598	329 aa	Known RBP	12.78	□□□□□ -0.36
LSM3	YLR438C-A	BIO4	P53630	237 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	YNL143C	P53908	130 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	YLR053C	Q12026	108 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	NCA2	Q12374	616 aa		12.78	□□□□□ -0.36
LSM3	YLR438C-A	GCD11	P32481	527 aa	Known RBP	12.77	□□□□□ -0.37
LSM3	YLR438C-A	YHI9	P38765	294 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	LRP1	P38801	184 aa	Known RBP	12.77	□□□□□ -0.37
LSM3	YLR438C-A	MEF2	P39677	819 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	GDH3	P39708	457 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	TES1	P41903	349 aa	Known RBP	12.77	□□□□□ -0.37
LSM3	YLR438C-A	EMC4	P53073	190 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	COG1	P53079	417 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	FAP1	P53971	965 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	PEX13	P80667	386 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	MCP2	Q06567	569 aa		12.77	□□□□□ -0.37
LSM3	YLR438C-A	RAD3	P06839	778 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	YCR051W	P25631	222 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	CYM1	P32898	989 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	YBR259W	P38338	688 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	LIN1	P38852	340 aa	Predicted RBP	12.76	□□□□□ -0.37
LSM3	YLR438C-A	ACO2	P39533	789 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	YIR007W	P40566	764 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	GLG2	P47011	380 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	CCT8	P47079	568 aa	Known RBP	12.76	□□□□□ -0.37
LSM3	YLR438C-A	YLR177W	Q06251	628 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	SYT1	Q06836	1226 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	KCS1	Q12494	1050 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	RGS2	Q99188	309 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	YOR338W	Q99326	363 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	CCH1	P50077	2039 aa		12.76	□□□□□ -0.37
LSM3	YLR438C-A	HSP26	P15992	214 aa	Known RBP RIP-Chip data	12.75	□□□□□ -0.37	not detected
LSM3	YLR438C-A	PYC2	P32327	1180 aa	Known RBP	12.75	□□□□□ -0.37
LSM3	YLR438C-A	RRP14	P36080	434 aa	Known RBP	12.75	□□□□□ -0.37
LSM3	YLR438C-A	PPX1	P38698	397 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	ALG8	P40351	577 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	VAC7	P53950	1165 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	TFB2	Q02939	513 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	CLU1	Q03690	1277 aa	Known RBP	12.75	□□□□□ -0.37
LSM3	YLR438C-A	YDR132C	Q03900	495 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	TAF11	Q04226	346 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	UTP13	Q05946	817 aa	Known RBP	12.75	□□□□□ -0.37
LSM3	YLR438C-A	TGL5	Q12043	749 aa		12.75	□□□□□ -0.37
LSM3	YLR438C-A	STB6	P36085	766 aa		12.74	□□□□□ -0.37
LSM3	YLR438C-A	FMO1	P38866	432 aa		12.74	□□□□□ -0.37

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms