RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W MAM1P40065 302 aa2.4□□□□□ -2.02
CBF2YGR140W IME4P41833 600 aa2.4□□□□□ -2.02
CBF2YGR140W UBX6P47049 396 aa2.4□□□□□ -2.02
CBF2YGR140W RSM28Q03430 361 aa2.4□□□□□ -2.02
CBF2YGR140W YEH1Q07804 573 aa2.4□□□□□ -2.02
CBF2YGR140W GPM3Q12326 303 aa2.4□□□□□ -2.02
CBF2YGR140W GPR1Q12361 961 aa2.4□□□□□ -2.02
CBF2YGR140W TRM11Q12463 433 aa2.4□□□□□ -2.02
CBF2YGR140W YOR019WQ99248 730 aa2.4□□□□□ -2.02
CBF2YGR140W VCX1Q99385 411 aa2.4□□□□□ -2.02
CBF2YGR140W INO80P53115 1489 aa2.4□□□□□ -2.03
CBF2YGR140W CPA2P03965 1118 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W RPL3P14126 387 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W PEX1P24004 1043 aa2.4□□□□□ -2.03
CBF2YGR140W RRP7P25368 297 aaPredicted RBP2.4□□□□□ -2.03
CBF2YGR140W MVD1P32377 396 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W DCG1P32460 244 aa2.4□□□□□ -2.03
CBF2YGR140W ERC1P38767 581 aa2.4□□□□□ -2.03
CBF2YGR140W RPP1P38786 293 aa2.4□□□□□ -2.03
CBF2YGR140W RTT105P40063 208 aa2.4□□□□□ -2.03
CBF2YGR140W CTH1P47976 325 aa2.4□□□□□ -2.03
CBF2YGR140W BNI5P53890 448 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W AAT1Q01802 451 aa2.4□□□□□ -2.03
CBF2YGR140W NGL2Q03264 515 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W EFR3Q03653 782 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W DPB4Q04603 196 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W VPS38Q05919 439 aa2.4□□□□□ -2.03
CBF2YGR140W SPH1Q06160 661 aa2.4□□□□□ -2.03
CBF2YGR140W RRP9Q06506 573 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W RLP24Q07915 199 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W SPE3Q12074 293 aaKnown RBP2.4□□□□□ -2.03
CBF2YGR140W GRX6Q12438 231 aa2.4□□□□□ -2.03
CBF2YGR140W AVL9Q12500 764 aa2.4□□□□□ -2.03
CBF2YGR140W YOL159C-AQ3E769 90 aa2.4□□□□□ -2.03
CBF2YGR140W CPR2P23285 205 aa2.39□□□□□ -2.03
CBF2YGR140W MTG2P38860 518 aa2.39□□□□□ -2.03
CBF2YGR140W YJL206CP39529 758 aa2.39□□□□□ -2.03
CBF2YGR140W YEL057CP39983 233 aa2.39□□□□□ -2.03
CBF2YGR140W FMP10P40098 244 aa2.39□□□□□ -2.03
CBF2YGR140W EFM4P40516 257 aa2.39□□□□□ -2.03
CBF2YGR140W FKH2P41813 862 aa2.39□□□□□ -2.03
CBF2YGR140W CAK1P43568 368 aaPredicted RBP2.39□□□□□ -2.03
CBF2YGR140W TEX1P53851 422 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W ROT1Q03691 256 aa2.39□□□□□ -2.03
CBF2YGR140W ARG7Q04728 441 aa2.39□□□□□ -2.03
CBF2YGR140W MLH2Q07980 695 aa2.39□□□□□ -2.03
CBF2YGR140W DCI1Q08558 271 aa2.39□□□□□ -2.03
CBF2YGR140W BUD7Q08754 746 aa2.39□□□□□ -2.03
CBF2YGR140W FMP40Q08968 688 aaPredicted RBP2.39□□□□□ -2.03
CBF2YGR140W YER175W-AQ8TGU4 54 aa2.39□□□□□ -2.03
CBF2YGR140W RPL6BP05739 176 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W HIS5P07172 385 aa2.39□□□□□ -2.03
CBF2YGR140W APN1P22936 367 aa2.39□□□□□ -2.03
CBF2YGR140W FEN2P25621 512 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W SEF1P34228 1148 aa2.39□□□□□ -2.03
CBF2YGR140W UIP5P36137 443 aa2.39□□□□□ -2.03
CBF2YGR140W URM1P40554 99 aaPredicted RBP2.39□□□□□ -2.03
CBF2YGR140W IRC8P47046 822 aa2.39□□□□□ -2.03
CBF2YGR140W STR3P53101 465 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W YGR035CP53222 116 aa2.39□□□□□ -2.03
CBF2YGR140W YGR111WP53265 400 aa2.39□□□□□ -2.03
CBF2YGR140W RIA1P53893 1110 aa2.39□□□□□ -2.03
CBF2YGR140W RPL6AQ02326 176 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W KAP120Q02932 1032 aa2.39□□□□□ -2.03
CBF2YGR140W HMO1Q03973 246 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W ROY1Q04847 553 aa2.39□□□□□ -2.03
CBF2YGR140W ATG23Q06671 453 aa2.39□□□□□ -2.03
CBF2YGR140W YFT2Q06676 274 aa2.39□□□□□ -2.03
CBF2YGR140W CHS5Q12114 671 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W MDY2Q12285 212 aa2.39□□□□□ -2.03
CBF2YGR140W NPC2Q12408 173 aa2.39□□□□□ -2.03
CBF2YGR140W HRP1Q99383 534 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W CET1O13297 549 aaPredicted RBP2.39□□□□□ -2.03
CBF2YGR140W MF(ALPHA)1P01149 165 aa2.39□□□□□ -2.03
CBF2YGR140W GAL80P04387 435 aa2.39□□□□□ -2.03
CBF2YGR140W MET3P08536 511 aa2.39□□□□□ -2.03
CBF2YGR140W LAT1P12695 482 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W HOM2P13663 365 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W EST1P17214 699 aaPredicted RBP2.39□□□□□ -2.03
CBF2YGR140W DAL80P26343 269 aa2.39□□□□□ -2.03
CBF2YGR140W URK1P27515 501 aa2.39□□□□□ -2.03
CBF2YGR140W SRB5P32585 307 aa2.39□□□□□ -2.03
CBF2YGR140W YPT7P32939 208 aa2.39□□□□□ -2.03
CBF2YGR140W NIP100P33420 868 aa2.39□□□□□ -2.03
CBF2YGR140W HCS1P34243 683 aa2.39□□□□□ -2.03
CBF2YGR140W UBP13P38187 747 aa2.39□□□□□ -2.03
CBF2YGR140W YHR097CP38809 366 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W GET2P40056 285 aa2.39□□□□□ -2.03
CBF2YGR140W ALG5P40350 334 aa2.39□□□□□ -2.03
CBF2YGR140W SEC24P40482 926 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W MET28P40573 187 aa2.39□□□□□ -2.03
CBF2YGR140W HXT14P42833 540 aa2.39□□□□□ -2.03
CBF2YGR140W LSB3P43603 459 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W PET130P47065 347 aa2.39□□□□□ -2.03
CBF2YGR140W MDE1P47095 244 aa2.39□□□□□ -2.03
CBF2YGR140W RPS7BP48164 190 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W YDL183CP48569 320 aa2.39□□□□□ -2.03
CBF2YGR140W DIA3P52290 468 aa2.39□□□□□ -2.03
CBF2YGR140W CWC22P53333 577 aaKnown RBP2.39□□□□□ -2.03
CBF2YGR140W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms