RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W HSF1P10961 833 aa12.42□□□□□ -0.42
PTP1YDL230W ACO1P19414 778 aaKnown RBP RIP-Chip data12.42□□□□□ -0.42not detected
PTP1YDL230W PAT1P25644 796 aaKnown RBP12.42□□□□□ -0.42
PTP1YDL230W HES1P35843 434 aa12.42□□□□□ -0.42
PTP1YDL230W MRP21P38175 177 aa12.42□□□□□ -0.42
PTP1YDL230W PRM2P40534 656 aa12.42□□□□□ -0.42
PTP1YDL230W YIL001WP40560 513 aa12.42□□□□□ -0.42
PTP1YDL230W RTT101P47050 842 aa12.42□□□□□ -0.42
PTP1YDL230W TAN1P53072 289 aaPredicted RBP12.42□□□□□ -0.42
PTP1YDL230W COP1P53622 1201 aaKnown RBP12.42□□□□□ -0.42
PTP1YDL230W CDC14Q00684 551 aa12.42□□□□□ -0.42
PTP1YDL230W FMP30Q02883 468 aa12.42□□□□□ -0.42
PTP1YDL230W YML083CQ04526 418 aa12.42□□□□□ -0.42
PTP1YDL230W CRN1Q06440 651 aa12.42□□□□□ -0.42
PTP1YDL230W GCD2P12754 651 aaPredicted RBP12.41□□□□□ -0.42
PTP1YDL230W NSP1P14907 823 aaKnown RBP12.41□□□□□ -0.42
PTP1YDL230W VPH1P32563 840 aaKnown RBP12.41□□□□□ -0.42
PTP1YDL230W KAP104P38217 918 aaKnown RBP12.41□□□□□ -0.42
PTP1YDL230W COG2P53271 262 aa12.41□□□□□ -0.42
PTP1YDL230W RPN4Q03465 531 aa12.41□□□□□ -0.42
PTP1YDL230W BCP1Q06338 283 aa12.41□□□□□ -0.42
PTP1YDL230W SNX3Q08826 162 aaKnown RBP12.41□□□□□ -0.42
PTP1YDL230W PGC1Q08959 321 aa12.41□□□□□ -0.42
PTP1YDL230W RRP36Q12481 300 aaPredicted RBP12.41□□□□□ -0.42
PTP1YDL230W ATP1P07251 545 aaKnown RBP12.4□□□□□ -0.42
PTP1YDL230W PDC5P16467 563 aaKnown RBP12.4□□□□□ -0.42
PTP1YDL230W SEC15P22224 910 aa12.4□□□□□ -0.42
PTP1YDL230W TFC3P34111 1160 aa12.4□□□□□ -0.42
PTP1YDL230W AVT3P36062 692 aa12.4□□□□□ -0.42
PTP1YDL230W FUI1P38196 639 aa12.4□□□□□ -0.42
PTP1YDL230W YHR131CP38835 850 aa12.4□□□□□ -0.42
PTP1YDL230W RIO2P40160 425 aaKnown RBP12.4□□□□□ -0.42
PTP1YDL230W MAM33P40513 266 aa12.4□□□□□ -0.42
PTP1YDL230W VMA13P41807 478 aaKnown RBP12.4□□□□□ -0.42
PTP1YDL230W VPS25P47142 202 aa12.4□□□□□ -0.42
PTP1YDL230W NUP100Q02629 959 aa12.4□□□□□ -0.42
PTP1YDL230W HPT1Q04178 221 aaKnown RBP12.4□□□□□ -0.42
PTP1YDL230W GLO2Q05584 274 aa12.4□□□□□ -0.42
PTP1YDL230W RMD5Q12508 421 aa12.4□□□□□ -0.42
PTP1YDL230W YLR422WQ06409 1932 aa12.4□□□□□ -0.42
PTP1YDL230W STE2D6VTK4 431 aa12.39□□□□□ -0.43
PTP1YDL230W CAR1P00812 333 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W MIS1P09440 975 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W MAS1P10507 462 aa12.39□□□□□ -0.43
PTP1YDL230W CLN1P20437 546 aa12.39□□□□□ -0.43
PTP1YDL230W SAN1P22470 610 aa12.39□□□□□ -0.43
PTP1YDL230W POA1P38218 177 aa12.39□□□□□ -0.43
PTP1YDL230W RFS1P38234 210 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W YJR061WP40355 935 aa12.39□□□□□ -0.43
PTP1YDL230W SEC28P40509 296 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W RLP7P40693 322 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W NUP84P52891 726 aa12.39□□□□□ -0.43
PTP1YDL230W DOS2P54858 310 aa12.39□□□□□ -0.43
PTP1YDL230W REX2P54964 269 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W PNG1Q02890 363 aa12.39□□□□□ -0.43
PTP1YDL230W RPN9Q04062 393 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W ECM38Q05902 660 aaPredicted RBP12.39□□□□□ -0.43
PTP1YDL230W SEC10Q06245 871 aa12.39□□□□□ -0.43
PTP1YDL230W MRI1Q06489 411 aaKnown RBP12.39□□□□□ -0.43
PTP1YDL230W UBX3Q12229 455 aa12.39□□□□□ -0.43
PTP1YDL230W YPL247CQ12523 523 aa12.39□□□□□ -0.43
PTP1YDL230W ART10P18634 518 aaKnown RBP12.38□□□□□ -0.43
PTP1YDL230W MET22P32179 357 aa12.38□□□□□ -0.43
PTP1YDL230W YKR051WP36142 418 aa12.38□□□□□ -0.43
PTP1YDL230W ECM13P38195 257 aa12.38□□□□□ -0.43
PTP1YDL230W GGA2P38817 585 aaKnown RBP12.38□□□□□ -0.43
PTP1YDL230W SET2P46995 733 aaKnown RBP12.38□□□□□ -0.43
PTP1YDL230W CUS2P53830 285 aaPredicted RBP12.38□□□□□ -0.43
PTP1YDL230W HDA3Q06623 655 aa12.38□□□□□ -0.43
PTP1YDL230W LPX1Q12405 387 aaKnown RBP12.38□□□□□ -0.43
PTP1YDL230W TSA1P34760 196 aaKnown RBP12.37□□□□□ -0.43
PTP1YDL230W PTC1P35182 281 aa12.37□□□□□ -0.43
PTP1YDL230W MNN1P39106 762 aa12.37□□□□□ -0.43
PTP1YDL230W SEC26P41810 973 aaKnown RBP12.37□□□□□ -0.43
PTP1YDL230W YFL052WP43551 465 aa12.37□□□□□ -0.43
PTP1YDL230W MRX6P48564 524 aa12.37□□□□□ -0.43
PTP1YDL230W FOL2P51601 243 aaKnown RBP12.37□□□□□ -0.43
PTP1YDL230W MCM6P53091 1017 aaKnown RBP12.37□□□□□ -0.43
PTP1YDL230W STR3P53101 465 aaKnown RBP12.37□□□□□ -0.43
PTP1YDL230W PEX8P53248 589 aa12.37□□□□□ -0.43
PTP1YDL230W MRN1Q08925 612 aaKnown RBP RIP-Chip data12.37□□□□□ -0.43not detected
PTP1YDL230W NDJ1Q12366 352 aa12.37□□□□□ -0.43
PTP1YDL230W PRC1P00729 532 aa12.36□□□□□ -0.43
PTP1YDL230W YAK1P14680 807 aa12.36□□□□□ -0.43
PTP1YDL230W AMD1P15274 810 aaKnown RBP12.36□□□□□ -0.43
PTP1YDL230W PGS1P25578 521 aa12.36□□□□□ -0.43
PTP1YDL230W ADD66P36040 267 aa12.36□□□□□ -0.43
PTP1YDL230W VRP1P37370 817 aa12.36□□□□□ -0.43
PTP1YDL230W GRS1P38088 690 aaKnown RBP12.36□□□□□ -0.43
PTP1YDL230W MSC7P38694 644 aa12.36□□□□□ -0.43
PTP1YDL230W PIK1P39104 1066 aa12.36□□□□□ -0.43
PTP1YDL230W HPM1P40481 377 aa12.36□□□□□ -0.43
PTP1YDL230W BST1P43571 1029 aa12.36□□□□□ -0.43
PTP1YDL230W PRO2P54885 456 aaKnown RBP12.36□□□□□ -0.43
PTP1YDL230W RSC4Q02206 625 aa12.36□□□□□ -0.43
PTP1YDL230W PET117Q02771 107 aa12.36□□□□□ -0.43
PTP1YDL230W LDB18Q07887 179 aa12.36□□□□□ -0.43
PTP1YDL230W TRE2Q08693 809 aa12.36□□□□□ -0.43
PTP1YDL230W YOR387CQ08910 206 aa12.36□□□□□ -0.43
PTP1YDL230W RUP1Q12242 671 aa12.36□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms