RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	TMN3	P40071	706 aa		5.05	□□□□□ -1.6
RPC53	YDL150W	SCS2	P40075	244 aa	Known RBP	5.05	□□□□□ -1.6
RPC53	YDL150W	QRI7	P43122	407 aa		5.05	□□□□□ -1.6
RPC53	YDL150W	YDL183C	P48569	320 aa		5.05	□□□□□ -1.6
RPC53	YDL150W	CEG1	Q01159	459 aa	Predicted RBP	5.05	□□□□□ -1.6
RPC53	YDL150W	RTK1	Q12100	620 aa	Predicted RBP	5.05	□□□□□ -1.6
RPC53	YDL150W	NCB2	Q92317	146 aa		5.05	□□□□□ -1.6
RPC53	YDL150W	NUP1	P20676	1076 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	CBP3	P21560	335 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	AAD3	P25612	363 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	VPS24	P36095	224 aa	Known RBP	5.04	□□□□□ -1.6
RPC53	YDL150W	SPL2	P38839	148 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	SWD1	P39706	426 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	XBP1	P40489	647 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	THI6	P41835	540 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	GAT1	P43574	510 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	YGR054W	P53235	642 aa	Known RBP	5.04	□□□□□ -1.6
RPC53	YDL150W	TEP1	P53916	434 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	DIN7	Q12086	430 aa		5.04	□□□□□ -1.6
RPC53	YDL150W	YPR117W	Q06116	2489 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	PGI1	P12709	554 aa	Known RBP	5.03	□□□□□ -1.6
RPC53	YDL150W	PHO81	P17442	1178 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	VPS33	P20795	691 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	RPS7A	P26786	190 aa	Known RBP	5.03	□□□□□ -1.6
RPC53	YDL150W	MGM1	P32266	881 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	PTH2	P34222	208 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	MRPL7	P36519	292 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	EHT1	P38295	451 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	RFC1	P38630	861 aa	Known RBP	5.03	□□□□□ -1.6
RPC53	YDL150W	YHL041W	P38730	149 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	YJL193W	P39542	402 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	LRO1	P40345	661 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	THI3	Q07471	609 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	DBP10	Q12389	995 aa	Known RBP	5.03	□□□□□ -1.6
RPC53	YDL150W	AI5_ALPHA	Q9ZZX1	630 aa		5.03	□□□□□ -1.6
RPC53	YDL150W	PDR18	P53756	1333 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	URA3	P03962	267 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	MSS18	P08593	268 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	ADH4	P10127	382 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	ARG1	P22768	420 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	PSF2	P40359	213 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	ECM16	Q04217	1267 aa	Known RBP	5.02	□□□□□ -1.61
RPC53	YDL150W	NKP2	Q06162	153 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	BRE1	Q07457	700 aa	Known RBP	5.02	□□□□□ -1.61
RPC53	YDL150W	CRD1	Q07560	283 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	ZPS1	Q12512	249 aa		5.02	□□□□□ -1.61
RPC53	YDL150W	RPL7A	P05737	244 aa	Known RBP	5.01	□□□□□ -1.61
RPC53	YDL150W	PIF1	P07271	859 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	DPB3	P27344	201 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	CAP1	P28495	268 aa	Known RBP	5.01	□□□□□ -1.61
RPC53	YDL150W	PIH1	P38768	344 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	PPE1	P38796	400 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	ULP2	P40537	1034 aa	Predicted RBP	5.01	□□□□□ -1.61
RPC53	YDL150W	YIP4	P53093	235 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	EFR3	Q03653	782 aa	Known RBP	5.01	□□□□□ -1.61
RPC53	YDL150W	TRS23	Q03784	219 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	ARR3	Q06598	404 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	RPL7B	Q12213	244 aa	Known RBP	5.01	□□□□□ -1.61
RPC53	YDL150W	RGT2	Q12300	763 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	RRI2	Q12348	645 aa		5.01	□□□□□ -1.61
RPC53	YDL150W	RAD50	P12753	1312 aa		5	□□□□□ -1.61
RPC53	YDL150W	CPA2	P03965	1118 aa	Known RBP	5	□□□□□ -1.61
RPC53	YDL150W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RPC53	YDL150W	SEC18	P18759	758 aa	Known RBP	5	□□□□□ -1.61
RPC53	YDL150W	LCB1	P25045	558 aa	Known RBP	5	□□□□□ -1.61
RPC53	YDL150W	MSH1	P25846	959 aa		5	□□□□□ -1.61
RPC53	YDL150W	CNE1	P27825	502 aa		5	□□□□□ -1.61
RPC53	YDL150W	IMA5	P40884	581 aa		5	□□□□□ -1.61
RPC53	YDL150W	MLC1	P53141	149 aa		5	□□□□□ -1.61
RPC53	YDL150W	IRC4	Q03036	179 aa		5	□□□□□ -1.61
RPC53	YDL150W	ATG16	Q03818	150 aa		5	□□□□□ -1.61
RPC53	YDL150W	DSS4	P32601	143 aa		4.99	□□□□□ -1.61
RPC53	YDL150W	KTR3	P38130	404 aa	Predicted RBP	4.99	□□□□□ -1.61
RPC53	YDL150W	ERG7	P38604	731 aa		4.99	□□□□□ -1.61
RPC53	YDL150W	ACA1	P39970	489 aa		4.99	□□□□□ -1.61
RPC53	YDL150W	YGL242C	P53066	181 aa		4.99	□□□□□ -1.61
RPC53	YDL150W	RPS15	Q01855	142 aa	Known RBP	4.99	□□□□□ -1.61
RPC53	YDL150W	EIS1	Q05050	843 aa	Known RBP	4.99	□□□□□ -1.61
RPC53	YDL150W	TAO3	P40468	2376 aa		4.99	□□□□□ -1.61
RPC53	YDL150W	CDC16	P09798	840 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	PCK1	P10963	549 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	APM3	P38153	483 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	MAD3	P47074	515 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	COQ6	P53318	479 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	MFM1	Q02783	413 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	YDL073W	Q07454	984 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	AAD4	Q07747	329 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	PSR2	Q07949	397 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	YPL216W	Q08964	1102 aa		4.98	□□□□□ -1.61
RPC53	YDL150W	MRS6	P32864	603 aa	Known RBP	4.97	□□□□□ -1.61
RPC53	YDL150W	LOT5	P34234	306 aa		4.97	□□□□□ -1.61
RPC53	YDL150W	KEL1	P38853	1164 aa	Known RBP	4.97	□□□□□ -1.61
RPC53	YDL150W	STT3	P39007	718 aa	Known RBP	4.97	□□□□□ -1.61
RPC53	YDL150W	VFA1	P40080	203 aa		4.97	□□□□□ -1.61
RPC53	YDL150W	ENT2	Q05785	613 aa		4.97	□□□□□ -1.61
RPC53	YDL150W	CIR2	Q08822	631 aa		4.97	□□□□□ -1.61
RPC53	YDL150W	TGS1	Q12052	315 aa		4.97	□□□□□ -1.61
RPC53	YDL150W	YMR084W	A2P2R3	262 aa		4.96	□□□□□ -1.62
RPC53	YDL150W	MIS1	P09440	975 aa	Known RBP	4.96	□□□□□ -1.62
RPC53	YDL150W	WHI2	P12611	486 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms