RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 HDA3Q06623 655 aa8.75□□□□□ -1.01
LSR1LSR1 CDA1Q06702 301 aa8.75□□□□□ -1.01
LSR1LSR1 HSH49Q99181 213 aaPredicted RBP8.75□□□□□ -1.01
LSR1LSR1 VPS3P23643 1011 aa8.74□□□□□ -1.01
LSR1LSR1 RAD16P31244 790 aa8.74□□□□□ -1.01
LSR1LSR1 SHE3P38272 425 aaKnown RBP8.74□□□□□ -1.01
LSR1LSR1 ARN1P38731 627 aa8.74□□□□□ -1.01
LSR1LSR1 YHB1P39676 399 aaKnown RBP8.74□□□□□ -1.01
LSR1LSR1 SEO1P39709 593 aa8.74□□□□□ -1.01
LSR1LSR1 YEL028WP39989 153 aa8.74□□□□□ -1.01
LSR1LSR1 SKP2P42843 763 aa8.74□□□□□ -1.01
LSR1LSR1 CCT7P42943 550 aaKnown RBP8.74□□□□□ -1.01
LSR1LSR1 RPS10BP46784 105 aaKnown RBP8.74□□□□□ -1.01
LSR1LSR1 GUF1P46943 645 aa8.74□□□□□ -1.01
LSR1LSR1 YNL115CP53925 644 aa8.74□□□□□ -1.01
LSR1LSR1 MET14Q02196 202 aa8.74□□□□□ -1.01
LSR1LSR1 SPP1Q03012 353 aa8.74□□□□□ -1.01
LSR1LSR1 SPC2Q04969 178 aa8.74□□□□□ -1.01
LSR1LSR1 RPS10AQ08745 105 aaPredicted RBP8.74□□□□□ -1.01
LSR1LSR1 NBP2Q12163 236 aa8.74□□□□□ -1.01
LSR1LSR1 REC8Q12188 680 aa8.74□□□□□ -1.01
LSR1LSR1 ADF1Q2V2Q1 113 aa8.74□□□□□ -1.01
LSR1LSR1 ATP6P00854 259 aa8.73□□□□□ -1.01
LSR1LSR1 GAL80P04387 435 aa8.73□□□□□ -1.01
LSR1LSR1 PRT1P06103 763 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 SPE1P08432 466 aa8.73□□□□□ -1.01
LSR1LSR1 SSA1P10591 642 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 ATR1P13090 542 aa8.73□□□□□ -1.01
LSR1LSR1 NDI1P32340 513 aa8.73□□□□□ -1.01
LSR1LSR1 GCD11P32481 527 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 PTC1P35182 281 aa8.73□□□□□ -1.01
LSR1LSR1 YBR259WP38338 688 aa8.73□□□□□ -1.01
LSR1LSR1 SRP68P38687 599 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 YHL026CP38740 315 aa8.73□□□□□ -1.01
LSR1LSR1 LAM1P38851 1228 aa8.73□□□□□ -1.01
LSR1LSR1 RAD55P38953 406 aa8.73□□□□□ -1.01
LSR1LSR1 MNN1P39106 762 aa8.73□□□□□ -1.01
LSR1LSR1 NPT1P39683 429 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 YJR061WP40355 935 aa8.73□□□□□ -1.01
LSR1LSR1 CAB2P40506 365 aa8.73□□□□□ -1.01
LSR1LSR1 CDC1P40986 491 aa8.73□□□□□ -1.01
LSR1LSR1 FMP32P43557 207 aa8.73□□□□□ -1.01
LSR1LSR1 SNG1P46950 547 aa8.73□□□□□ -1.01
LSR1LSR1 DCP2P53550 970 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 YNL134CP53912 376 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 NAN1Q02931 896 aaKnown RBP8.73□□□□□ -1.01
LSR1LSR1 DYN3Q04949 312 aa8.73□□□□□ -1.01
LSR1LSR1 ECM38Q05902 660 aaPredicted RBP8.73□□□□□ -1.01
LSR1LSR1 GRX8Q05926 109 aa8.73□□□□□ -1.01
LSR1LSR1 SYT1Q06836 1226 aa8.73□□□□□ -1.01
LSR1LSR1 YEH2Q07950 538 aa8.73□□□□□ -1.01
LSR1LSR1 YOL019WQ08157 551 aa8.73□□□□□ -1.01
LSR1LSR1 MSH5Q12175 901 aa8.73□□□□□ -1.01
LSR1LSR1 RMD5Q12508 421 aa8.73□□□□□ -1.01
LSR1LSR1 COX5AP00424 153 aa8.72□□□□□ -1.01
LSR1LSR1 GLN4P13188 809 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 APE1P14904 514 aa8.72□□□□□ -1.01
LSR1LSR1 SEC15P22224 910 aa8.72□□□□□ -1.01
LSR1LSR1 ASK1P35734 292 aa8.72□□□□□ -1.01
LSR1LSR1 APE3P37302 537 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 GRS1P38088 690 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 GIP1P38229 639 aa8.72□□□□□ -1.01
LSR1LSR1 BSD2P38356 321 aa8.72□□□□□ -1.01
LSR1LSR1 SNL1P40548 159 aa8.72□□□□□ -1.01
LSR1LSR1 BNA3P47039 444 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 ALT2P52892 507 aa8.72□□□□□ -1.01
LSR1LSR1 SPC98P53540 846 aa8.72□□□□□ -1.01
LSR1LSR1 SLM2P53955 656 aa8.72□□□□□ -1.01
LSR1LSR1 YNL010WP53981 241 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 REX2P54964 269 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 ENT5Q03769 411 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 YDR179W-AQ03983 463 aa8.72□□□□□ -1.01
LSR1LSR1 JIP5Q06214 492 aaPredicted RBP8.72□□□□□ -1.01
LSR1LSR1 SWC7Q06707 132 aa8.72□□□□□ -1.01
LSR1LSR1 YPR097WQ06839 1073 aa8.72□□□□□ -1.01
LSR1LSR1 PSR1Q07800 427 aa8.72□□□□□ -1.01
LSR1LSR1 NSE1Q07913 336 aa8.72□□□□□ -1.01
LSR1LSR1 ESA1Q08649 445 aa8.72□□□□□ -1.01
LSR1LSR1 CMR1Q12510 522 aaKnown RBP8.72□□□□□ -1.01
LSR1LSR1 YPL247CQ12523 523 aa8.72□□□□□ -1.01
LSR1LSR1 CCP1P00431 361 aa8.71□□□□□ -1.02
LSR1LSR1 SUI3P09064 285 aaKnown RBP8.71□□□□□ -1.02
LSR1LSR1 ADY2P25613 283 aa8.71□□□□□ -1.02
LSR1LSR1 YIH1P25637 258 aa8.71□□□□□ -1.02
LSR1LSR1 TKL2P33315 681 aa8.71□□□□□ -1.02
LSR1LSR1 DUR3P33413 735 aa8.71□□□□□ -1.02
LSR1LSR1 MOT2P34909 587 aaKnown RBP8.71□□□□□ -1.02
LSR1LSR1 DRE2P36152 348 aa8.71□□□□□ -1.02
LSR1LSR1 KAP104P38217 918 aaKnown RBP8.71□□□□□ -1.02
LSR1LSR1 FES1P38260 290 aa8.71□□□□□ -1.02
LSR1LSR1 AMN1P38285 549 aaPredicted RBP8.71□□□□□ -1.02
LSR1LSR1 BRL1P38770 471 aa8.71□□□□□ -1.02
LSR1LSR1 XDJ1P39102 459 aa8.71□□□□□ -1.02
LSR1LSR1 FHL1P39521 936 aa8.71□□□□□ -1.02
LSR1LSR1 EDC3P39998 551 aaKnown RBP8.71□□□□□ -1.02
LSR1LSR1 PRM2P40534 656 aa8.71□□□□□ -1.02
LSR1LSR1 MPH1P40562 993 aa8.71□□□□□ -1.02
LSR1LSR1 GCV2P49095 1034 aa8.71□□□□□ -1.02
LSR1LSR1 SRL4Q03085 281 aa8.71□□□□□ -1.02
LSR1LSR1 RLI1Q03195 608 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms