RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 XRCC5P13010 732 aaKnown RBP23.97■■□□□ 1.43
GABRD-216ENST00000640688 PLEKHH3Q7Z736 793 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 TTC6Q86TZ1 520 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 CERS3Q8IU89 383 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 C7orf61Q8IZ16 206 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 SOCS4Q8WXH5 440 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
GABRD-216ENST00000640688 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 MAGEB6P1A0A0J9YX57 407 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 PDE6AP16499 860 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 VCAM1P19320 739 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 CCND3P30281 292 aaPredicted RBP23.96■■□□□ 1.43
GABRD-216ENST00000640688 PDE3AQ14432 1141 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 CATSPERGQ6ZRH7 1159 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 SIRT2Q8IXJ6 389 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 EDC3Q96F86 508 aaKnown RBP23.96■■□□□ 1.43
GABRD-216ENST00000640688 NBPF3Q9H094 633 aa23.96■■□□□ 1.43
GABRD-216ENST00000640688 ZMYND8Q9ULU4 1186 aaPredicted RBP23.96■■□□□ 1.43
GABRD-216ENST00000640688 USP17L15C9J2P7 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L13C9JLJ4 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L11C9JVI0 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L18D6R9N7 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L22D6RA61 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L17D6RBQ6 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L19D6RCP7 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L20D6RJB6 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 ZKSCAN1P17029 563 aaPredicted RBP23.95■■□□□ 1.42
GABRD-216ENST00000640688 GABPAQ06546 454 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 USP17L24Q0WX57 530 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 SLFNL1Q499Z3 407 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 SLC9C2Q5TAH2 1124 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 CCAR1Q8IX12 1150 aaKnown RBP23.95■■□□□ 1.42
GABRD-216ENST00000640688 GTF3C2Q8WUA4 911 aaPredicted RBP23.95■■□□□ 1.42
GABRD-216ENST00000640688 KIAA1683Q9H0B3 1180 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 RABGAP1Q9Y3P9 1069 aa23.95■■□□□ 1.42
GABRD-216ENST00000640688 PFASO15067 1338 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 ZNF532Q9HCE3 1301 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 RGS2P41220 211 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 SEPT2Q15019 361 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 SDR42E1Q8WUS8 393 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 DNAJC2Q99543 621 aaKnown RBP23.94■■□□□ 1.42
GABRD-216ENST00000640688 C11orf49Q9H6J7 331 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 BTBD7Q9P203 1132 aa23.94■■□□□ 1.42
GABRD-216ENST00000640688 TCRBV5S4A2TA0A5A2 114 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 GOLIM4O00461 696 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 POLR3DP05423 398 aaPredicted RBP23.93■■□□□ 1.42
GABRD-216ENST00000640688 CYP2D6P10635 497 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 SYN1P17600 705 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 USP14P54578 494 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
GABRD-216ENST00000640688 LHX8Q68G74 356 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 LCORLQ8N3X6 602 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 FLRT1Q9NZU1 646 aa23.93■■□□□ 1.42
GABRD-216ENST00000640688 FRMPD3Q5JV73 1810 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 A0A1W2PRG0 241 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 TTF1Q15361 905 aaPredicted RBP23.92■■□□□ 1.42
GABRD-216ENST00000640688 HSP90AB4PQ58FF6 505 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 LRCH3Q96II8 777 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 APBA2Q99767 749 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 GDF15Q99988 308 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 RPAP3Q9H6T3 665 aaPredicted RBP23.92■■□□□ 1.42
GABRD-216ENST00000640688 CABP5Q9NP86 173 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 MCM9Q9NXL9 1143 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 COG6Q9Y2V7 657 aa23.92■■□□□ 1.42
GABRD-216ENST00000640688 SPDYE16A6NNV3 312 aaPredicted RBP23.91■■□□□ 1.42
GABRD-216ENST00000640688 MAP2K5Q13163 448 aa23.91■■□□□ 1.42
GABRD-216ENST00000640688 WDR78Q5VTH9 848 aa23.91■■□□□ 1.42
GABRD-216ENST00000640688 TMED8Q6PL24 325 aaPredicted RBP23.91■■□□□ 1.42
GABRD-216ENST00000640688 TRMT44Q8IYL2 757 aaKnown RBP23.91■■□□□ 1.42
GABRD-216ENST00000640688 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
GABRD-216ENST00000640688 SLC44A5Q8NCS7 719 aa23.91■■□□□ 1.42
GABRD-216ENST00000640688 CRNKL1Q9BZJ0 848 aaKnown RBP23.91■■□□□ 1.42
GABRD-216ENST00000640688 SMIM22K7EJ46 135 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 CHGBP05060 677 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 CWC22Q9HCG8 908 aaKnown RBP23.9■■□□□ 1.42
GABRD-216ENST00000640688 DCP1AQ9NPI6 582 aaPredicted RBP23.9■■□□□ 1.42
GABRD-216ENST00000640688 ZBTB40Q9NUA8 1239 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 DNAH12Q6ZR08 3092 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 RLFQ13129 1914 aa23.9■■□□□ 1.42
GABRD-216ENST00000640688 BAZ2AQ9UIF9 1905 aaKnown RBP23.89■■□□□ 1.42
GABRD-216ENST00000640688 A0A1W2PPC1 479 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 MPHOSPH10O00566 681 aaKnown RBP23.89■■□□□ 1.41
GABRD-216ENST00000640688 IFIT2P09913 472 aaKnown RBP23.89■■□□□ 1.41
GABRD-216ENST00000640688 COL6A1P12109 1028 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 PTPREP23469 700 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 KIAA1755Q5JYT7 1200 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 LBX2Q6XYB7 198 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.89■■□□□ 1.41
GABRD-216ENST00000640688 DYNLL2Q96FJ2 89 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 ARMT1Q9H993 441 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 COL6A3P12111 3177 aa23.89■■□□□ 1.41
GABRD-216ENST00000640688 PRKAB2O43741 272 aa23.88■■□□□ 1.41
GABRD-216ENST00000640688 CCNA1P78396 465 aa23.88■■□□□ 1.41
GABRD-216ENST00000640688 CLEC10AQ8IUN9 316 aa23.88■■□□□ 1.41
GABRD-216ENST00000640688 RPAP2Q8IXW5 612 aaPredicted RBP23.88■■□□□ 1.41
GABRD-216ENST00000640688 NPLOC4Q8TAT6 608 aa23.88■■□□□ 1.41
GABRD-216ENST00000640688 MYH8P13535 1937 aa23.88■■□□□ 1.41
GABRD-216ENST00000640688 BOLA2Q9H3K6 86 aa23.87■■□□□ 1.41
GABRD-216ENST00000640688 SLC15A5A6NIM6 579 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms