RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 PLIN4Q96Q06 1357 aa14.19□□□□□ -0.14
CACNA1D-228ENST00000638120 YDJCA8MPS7 323 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 GNL2Q13823 731 aaKnown RBP14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 PKN1Q16512 942 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 KIF5BP33176 963 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 LINC00301Q8NCQ3 95 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 SERPINA10Q9UK55 444 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
CACNA1D-228ENST00000638120 MYO3BQ8WXR4 1341 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 ZBTB7AO95365 584 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 ANO1Q5XXA6 986 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 SRBD1Q8N5C6 995 aaKnown RBP14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 PANK2Q9BZ23 570 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 TSPY26PQ9H489 355 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 DACT1Q9NYF0 836 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
CACNA1D-228ENST00000638120 BRCA1P38398 1863 aaKnown RBP14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 COL4A5P29400 1685 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 XBP1P17861 261 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 NOVP48745 357 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 TGFB2P61812 414 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 NFIAQ12857 509 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 GRM4Q14833 912 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 STK38Q15208 465 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 TMEM47Q9BQJ4 181 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 MTFR1LQ9H019 292 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 RBSNQ9H1K0 784 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 SIPA1L1O43166 1804 aa14.16□□□□□ -0.14
CACNA1D-228ENST00000638120 BTBD18B2RXH4 712 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 ME1P48163 572 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 SOGA3Q5TF21 947 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 SHISA4Q96DD7 197 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 SERPINB13Q9UIV8 391 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 PCDHAC2Q9Y5I4 1007 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 GREB1LQ9C091 1923 aaPredicted RBP14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 SPTLC2O15270 562 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 NR1I2O75469 434 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 HLA-DOAP06340 250 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 POLD1P28340 1107 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 GNAQP50148 359 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 RBM5P52756 815 aaKnown RBP eCLIP14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 CEP95Q96GE4 821 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 PHF20Q9BVI0 1012 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 EHD4Q9H223 541 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 PCDHA7Q9UN72 937 aa14.15□□□□□ -0.14
CACNA1D-228ENST00000638120 A0A1W2PQ27 194 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 A0A1W2PQ64 194 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 A0A1W2PQD8 194 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 ADALQ6DHV7 355 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 FUCA2Q9BTY2 467 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 CLSTN2Q9H4D0 955 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 VPS54Q9P1Q0 977 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 PIM2Q9P1W9 311 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 MAD2L2Q9UI95 211 aa14.14□□□□□ -0.15
CACNA1D-228ENST00000638120 hCG_1642624A0A1W2PR95 340 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 TOP1P11387 765 aaKnown RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 SCG2P13521 617 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 SHMT1P34896 483 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 PFKFB3Q16875 520 aaPredicted RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 CCDC73Q6ZRK6 1079 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 GOLPH3LQ9H4A5 285 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 FAM198AQ9UFP1 575 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 IGKV6D-41A0A0C4DH26 115 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 PALM3A6NDB9 673 aaPredicted RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 AKR1B1P15121 316 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 NR5A1Q13285 461 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 PTPAQ15257 358 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 MAP3K11Q16584 847 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 RBM43Q6ZSC3 357 aaKnown RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 TNMDQ9H2S6 317 aa14.13□□□□□ -0.15
CACNA1D-228ENST00000638120 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
CACNA1D-228ENST00000638120 PPP6R2O75170 966 aa14.12□□□□□ -0.15
CACNA1D-228ENST00000638120 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms