RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 DYNC1I1O14576 645 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 GOLGA8HP0CJ92 632 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 NPY5RQ15761 445 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 KLHL34Q8N239 644 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 CRNKL1Q9BZJ0 848 aaKnown RBP21.66■■□□□ 1.06
CLN5-216ENST00000636780 IL17RBQ9NRM6 502 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.65■■□□□ 1.06
CLN5-216ENST00000636780 RRP9O43818 475 aaKnown RBP21.65■■□□□ 1.06
CLN5-216ENST00000636780 SERPINC1P01008 464 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 CDC25BP30305 580 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 USP5P45974 858 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 MED15Q96RN5 788 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 MAN1B1Q9UKM7 699 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 STX17P56962 302 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 GLIPR1L2Q4G1C9 344 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 RCSD1Q6JBY9 416 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 KLHL10Q6JEL2 608 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 PIK3AP1Q6ZUJ8 805 aa21.65■■□□□ 1.06
CLN5-216ENST00000636780 RILPL1Q5EBL4 403 aa21.64■■□□□ 1.06
CLN5-216ENST00000636780 PHF20Q9BVI0 1012 aa21.64■■□□□ 1.06
CLN5-216ENST00000636780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.64■■□□□ 1.06
CLN5-216ENST00000636780 VWA3AA6NCI4 1184 aa21.64■■□□□ 1.05
CLN5-216ENST00000636780 SLURP2P0DP57 97 aa21.64■■□□□ 1.05
CLN5-216ENST00000636780 POSTNQ15063 836 aa21.64■■□□□ 1.05
CLN5-216ENST00000636780 CFAP100Q494V2 611 aa21.64■■□□□ 1.05
CLN5-216ENST00000636780 RNF26Q9BY78 433 aaPredicted RBP21.64■■□□□ 1.05
CLN5-216ENST00000636780 UBASH3AP57075 661 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 COL5A3P25940 1745 aaPredicted RBP21.63■■□□□ 1.05
CLN5-216ENST00000636780 MCM7P33993 719 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 GPSM2P81274 684 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 TMTC3Q6ZXV5 915 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 PRIMPOLQ96LW4 560 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 KRT2P35908 639 aa21.63■■□□□ 1.05
CLN5-216ENST00000636780 SYMPKQ92797 1274 aaKnown RBP21.63■■□□□ 1.05
CLN5-216ENST00000636780 SAMSN1Q9NSI8 373 aaKnown RBP21.63■■□□□ 1.05
CLN5-216ENST00000636780 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
CLN5-216ENST00000636780 TYW1BQ6NUM6 668 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 BLZF1Q9H2G9 400 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 CNTNAP5Q8WYK1 1306 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 TRIM75PA6NK02 468 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 SLC35G1Q2M3R5 365 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
CLN5-216ENST00000636780 PRR5LQ6MZQ0 368 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
CLN5-216ENST00000636780 TIGD1Q96MW7 591 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 ANKRD2Q9GZV1 360 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 INTS13Q9NVM9 706 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 STX8Q9UNK0 236 aa21.62■■□□□ 1.05
CLN5-216ENST00000636780 RREB1Q92766 1687 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 PRPF3O43395 683 aaKnown RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 NLRP5P59047 1200 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 PTGDRQ13258 359 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 RC3H1Q5TC82 1133 aaKnown RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 CTCFLQ8NI51 663 aaPredicted RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 PLIN2Q99541 437 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 TMX1Q9H3N1 280 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 SRPRBQ9Y5M8 271 aaKnown RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 TIAM2Q8IVF5 1701 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 F8W031 263 aaPredicted RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 ACTN4O43707 911 aaKnown RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 MYL5Q02045 173 aa21.61■■□□□ 1.05
CLN5-216ENST00000636780 E4F1Q66K89 784 aaPredicted RBP21.61■■□□□ 1.05
CLN5-216ENST00000636780 IL17AQ16552 155 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 MKNK2Q9HBH9 465 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 DUOX1Q9NRD9 1551 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 IRS2Q9Y4H2 1338 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 RIMBP2O15034 1052 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 MXD3Q9BW11 206 aa21.6■■□□□ 1.05
CLN5-216ENST00000636780 FAM205AQ6ZU69 1335 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 UFL1O94874 794 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 CEP135Q66GS9 1140 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 LAMB2P55268 1798 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 FGRP09769 529 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 CD44P16070 742 aaKnown RBP21.59■■□□□ 1.05
CLN5-216ENST00000636780 BPIFA3Q9BQP9 254 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 MAPK8IP1Q9UQF2 711 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 NFE2L3Q9Y4A8 694 aa21.59■■□□□ 1.05
CLN5-216ENST00000636780 CASZ1Q86V15 1759 aa21.58■■□□□ 1.05
CLN5-216ENST00000636780 SMTNL1A8MU46 457 aa21.58■■□□□ 1.05
CLN5-216ENST00000636780 GRAPQ13588 217 aa21.58■■□□□ 1.05
CLN5-216ENST00000636780 CREBRFQ8IUR6 639 aa21.58■■□□□ 1.05
CLN5-216ENST00000636780 SEPT12Q8IYM1 358 aa21.58■■□□□ 1.05
CLN5-216ENST00000636780 CCAR2Q8N163 923 aaKnown RBP21.58■■□□□ 1.05
CLN5-216ENST00000636780 GRAPLQ8TC17 118 aaPredicted RBP21.58■■□□□ 1.05
CLN5-216ENST00000636780 CLEC10AQ8IUN9 316 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 FAM177A1Q8N128 213 aaPredicted RBP21.58■■□□□ 1.04
CLN5-216ENST00000636780 SMARCE1Q969G3 411 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.04
CLN5-216ENST00000636780 PDCL3Q9H2J4 239 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 VAT1LQ9HCJ6 419 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 ATP8A2Q9NTI2 1148 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 NID2Q14112 1375 aa21.58■■□□□ 1.04
CLN5-216ENST00000636780 TNRC6CQ9HCJ0 1690 aaKnown RBP21.57■■□□□ 1.04
CLN5-216ENST00000636780 PP2D1A8MPX8 630 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 PNMA1Q8ND90 353 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 SFPQP23246 707 aaKnown RBP eCLIP21.57■■□□□ 1.04
CLN5-216ENST00000636780 ADKP55263 362 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms