RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 CCDC170Q8IYT3 715 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 DYDC1Q8WWB3 177 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 BICD1Q96G01 975 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 MAF1Q9H063 256 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 TMEM94Q12767 1356 aa7.68□□□□□ -1.18
SCN1A-213ENST00000636759 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.68□□□□□ -1.18
SCN1A-213ENST00000636759 LUC7L3O95232 432 aaKnown RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 DPCR1Q3MIW9 517 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 TOGARAM2Q6ZUX3 1019 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 NAPGQ99747 312 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 HAUS2Q9NVX0 235 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 COL15A1P39059 1388 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 ATP2C2O75185 946 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 GCLCP48506 637 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 CCDC57Q2TAC2 916 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 CCDC38Q502W7 563 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 NAA35Q5VZE5 725 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 KRT28Q7Z3Y7 464 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 KIAA0825Q8IV33 1275 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 KAZALD1Q96I82 304 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 UTYO14607 1347 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 GRIN2DO15399 1336 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 SLC3A2P08195 630 aaKnown RBP7.67□□□□□ -1.18
SCN1A-213ENST00000636759 KIF5BP33176 963 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 CD151P48509 253 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 VSTM4Q8IW00 320 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 FAM114A1Q8IWE2 563 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 BPIFA3Q9BQP9 254 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 AXIN2Q9Y2T1 843 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
SCN1A-213ENST00000636759 SPDYE3A6NKU9 549 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ZSCAN9O15535 394 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 SMNDC1O75940 238 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 EIF2S2P20042 333 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ATP1A2P50993 1020 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ACCSLQ4AC99 568 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 USHBP1Q8N6Y0 703 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 DTNBP1Q96EV8 351 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 MMTAG2Q9BU76 263 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 MMADHCQ9H3L0 296 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 NHSL1Q5SYE7 1610 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 CREB3O43889 395 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 HOXB7P09629 217 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 FAM163BP0C2L3 166 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ANKRD1Q15327 319 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 NOA1Q8NC60 698 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 CCHCR1Q8TD31 782 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ZNF473Q8WTR7 871 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 RUFY2Q8WXA3 655 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 CUL5Q93034 780 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 NOD2Q9HC29 1040 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 NOP53Q9NZM5 478 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 KIAA1468Q9P260 1216 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 C15orf41Q9Y2V0 281 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 TNS3Q68CZ2 1445 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 LRRD1A4D1F6 860 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 HSF2BPO75031 334 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 ATP1A3P13637 1013 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 PSMA5P28066 241 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 EIF4A1P60842 406 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 SDCCAG8Q86SQ7 713 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 TMTC2Q8N394 836 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 EHBP1Q8NDI1 1231 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 MRPS27Q92552 414 aaKnown RBP7.66□□□□□ -1.18
SCN1A-213ENST00000636759 STAMBPL1Q96FJ0 436 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 SELENOOQ9BVL4 669 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 EPN3Q9H201 632 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 MYH7P12883 1935 aa7.66□□□□□ -1.18
SCN1A-213ENST00000636759 RBM47A0AV96 593 aaKnown RBP7.65□□□□□ -1.18
SCN1A-213ENST00000636759 MXRA7P84157 204 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 CCDC178Q5BJE1 867 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 TBC1D5Q92609 795 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 SH3GL2Q99962 352 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 GORASP1Q9BQQ3 440 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 FANCLQ9NW38 375 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 SPEF2Q9C093 1822 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 MED23Q9ULK4 1368 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 H7C1W4 665 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 IKBKBO14920 756 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 MYL1P05976 194 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 USP14P54578 494 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 NLRP12P59046 1061 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 MYL5Q02045 173 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
SCN1A-213ENST00000636759 STK3Q13188 491 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 HDGFL1Q5TGJ6 251 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 HIBCHQ6NVY1 386 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-213ENST00000636759 OLFM4Q6UX06 510 aa7.65□□□□□ -1.18
SCN1A-213ENST00000636759 FAM228AQ86W67 206 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms