RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 TESPA1A2RU30 521 aaPredicted RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 USP17L10C9JJH3 530 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 E7EWF7 191 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 SLC27A2O14975 620 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 RANBP6O60518 1105 aaKnown RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 CETPP11597 493 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 HSPA4P34932 840 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 USP14P54578 494 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 BACE1P56817 501 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 INHBEP58166 350 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 TFAP4Q01664 338 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 TRDNQ13061 729 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 SPP2Q13103 211 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 MTMR2Q13614 643 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 CCL15Q16663 113 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 C8orf34Q49A92 452 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 SH3D19Q5HYK7 790 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 FAM47AQ5JRC9 791 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 PPP4R3BQ5MIZ7 849 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 CREB3L3Q68CJ9 461 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 STOX1Q6ZVD7 989 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 RALYLQ86SE5 291 aaKnown RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 JMYQ8N9B5 988 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 PROCA1Q8NCQ7 364 aaPredicted RBP6.29□□□□□ -1.4
CHD2-224ENST00000636410 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 NCOA7Q8NI08 942 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 ESR2Q92731 530 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 CEP95Q96GE4 821 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 MS4A4AQ96JQ5 239 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 FEZ1Q99689 392 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD2-224ENST00000636410 KRT23Q9C075 422 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 SH2D4AQ9H788 454 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 KANSL2Q9H9L4 492 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
CHD2-224ENST00000636410 B4E1Z4 1266 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 C19orf81C9J6K1 198 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 KDM4AO75164 1064 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TTLL1O95922 423 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 EEF2P13639 858 aaKnown RBP6.28□□□□□ -1.4
CHD2-224ENST00000636410 ZKSCAN1P17029 563 aaPredicted RBP6.28□□□□□ -1.4
CHD2-224ENST00000636410 MCCP23508 829 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TM4SF4P48230 202 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 NOVP48745 357 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 HMGCS2P54868 508 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 MAP2K1Q02750 393 aaPredicted RBP6.28□□□□□ -1.4
CHD2-224ENST00000636410 MOGSQ13724 837 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 FASTKD5Q7L8L6 764 aaKnown RBP6.28□□□□□ -1.4
CHD2-224ENST00000636410 IQCA1Q86XH1 822 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 ACER1Q8TDN7 264 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 BRI3BPQ8WY22 251 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 KCNB2Q92953 911 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 C12orf42Q96LP6 360 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 ZIC5Q96T25 663 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 IL17RBQ9NRM6 502 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TCP11L1Q9NUJ3 509 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 MTMR4Q9NYA4 1195 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 NYAP2Q9P242 653 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 SYNPO2Q9UMS6 1093 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TAF6LQ9Y6J9 622 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 RLFQ13129 1914 aa6.28□□□□□ -1.4
CHD2-224ENST00000636410 TNKSO95271 1327 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 A0A1W2PRG0 241 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 BTBD19C9JJ37 291 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 IGF2BP3O00425 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD2-224ENST00000636410 NMT2O60551 498 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ALDH1A1P00352 501 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ATP2B2Q01814 1243 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD2-224ENST00000636410 DGKZQ13574 1117 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 KRT32Q14532 448 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
CHD2-224ENST00000636410 TSGA10IPQ3SY00 556 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 USP17L2Q6R6M4 530 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 CYB5R4Q7L1T6 521 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 IFNL1Q8IU54 200 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 MB21D2Q8IYB1 491 aaPredicted RBP6.27□□□□□ -1.41
CHD2-224ENST00000636410 RASEFQ8IZ41 740 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 GMCL1P1Q8NEA9 526 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 NKX2-3Q8TAU0 364 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 LPAR1Q92633 364 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 MKL1Q969V6 931 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ZSCAN10Q96SZ4 725 aaPredicted RBP6.27□□□□□ -1.41
CHD2-224ENST00000636410 PTPN18Q99952 460 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 USP26Q9BXU7 913 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 VCPKMTQ9H867 229 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 GOPCQ9HD26 462 aa6.27□□□□□ -1.41
CHD2-224ENST00000636410 ZCCHC17Q9NP64 241 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms