RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 PABPC4Q13310 644 aaKnown RBP eCLIP22.14■■□□□ 1.13
CLN6-214ENST00000636314 SH3D19Q5HYK7 790 aa22.14■■□□□ 1.13
CLN6-214ENST00000636314 TATDN1Q6P1N9 297 aa22.14■■□□□ 1.13
CLN6-214ENST00000636314 CRISPLD2Q9H0B8 497 aa22.14■■□□□ 1.13
CLN6-214ENST00000636314 DCP1AQ9NPI6 582 aaPredicted RBP22.14■■□□□ 1.13
CLN6-214ENST00000636314 STAP2Q9UGK3 403 aa22.14■■□□□ 1.13
CLN6-214ENST00000636314 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
CLN6-214ENST00000636314 GH2P01242 217 aa22.13■■□□□ 1.13
CLN6-214ENST00000636314 GCLCP48506 637 aaPredicted RBP22.13■■□□□ 1.13
CLN6-214ENST00000636314 NECAB2Q7Z6G3 386 aa22.13■■□□□ 1.13
CLN6-214ENST00000636314 KBTBD3Q8NAB2 608 aa22.13■■□□□ 1.13
CLN6-214ENST00000636314 DIS3LQ8TF46 1054 aaKnown RBP22.13■■□□□ 1.13
CLN6-214ENST00000636314 TMOD4Q9NZQ9 345 aa22.13■■□□□ 1.13
CLN6-214ENST00000636314 A0A1W2PPC1 479 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 ERC2O15083 957 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 HMGCRP04035 888 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 BACE1P56817 501 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 CERKLQ49MI3 558 aaPredicted RBP22.12■■□□□ 1.13
CLN6-214ENST00000636314 DDRGK1Q96HY6 314 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 ATP8A2Q9NTI2 1148 aa22.12■■□□□ 1.13
CLN6-214ENST00000636314 USP17L10C9JJH3 530 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 PRKAB2O43741 272 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 SHMT1P34896 483 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 HDAC1Q13547 482 aaPredicted RBP22.11■■□□□ 1.13
CLN6-214ENST00000636314 AAMPQ13685 434 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 ABCB5Q2M3G0 1257 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 C7orf61Q8IZ16 206 aa22.11■■□□□ 1.13
CLN6-214ENST00000636314 ASCC2Q9H1I8 757 aaPredicted RBP22.11■■□□□ 1.13
CLN6-214ENST00000636314 C19orf81C9J6K1 198 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 SOX1O00570 391 aaPredicted RBP22.1■■□□□ 1.13
CLN6-214ENST00000636314 MX1P20591 662 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 GABPAQ06546 454 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 RAB3GAP1Q15042 981 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 AMOTL1Q8IY63 956 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 OTUD7AQ8TE49 926 aaPredicted RBP22.1■■□□□ 1.13
CLN6-214ENST00000636314 FEZ1Q99689 392 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 PUS7LQ9H0K6 701 aaKnown RBP22.1■■□□□ 1.13
CLN6-214ENST00000636314 CABP5Q9NP86 173 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 SLC4A4Q9Y6R1 1079 aa22.1■■□□□ 1.13
CLN6-214ENST00000636314 GLRX3O76003 335 aaKnown RBP22.09■■□□□ 1.13
CLN6-214ENST00000636314 CYP2D6P10635 497 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 EVX2Q03828 476 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 TRIM32Q13049 653 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 ANKRD45Q5TZF3 282 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 ANKLE1Q8NAG6 615 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 LRCH3Q96II8 777 aa22.09■■□□□ 1.13
CLN6-214ENST00000636314 HMX1Q9NP08 348 aaPredicted RBP22.09■■□□□ 1.13
CLN6-214ENST00000636314 RPTORQ8N122 1335 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 ZFYP08048 801 aaPredicted RBP22.08■■□□□ 1.13
CLN6-214ENST00000636314 IRX3P78415 501 aaPredicted RBP22.08■■□□□ 1.13
CLN6-214ENST00000636314 LRRFIP1Q32MZ4 808 aaKnown RBP22.08■■□□□ 1.13
CLN6-214ENST00000636314 SLC17A8Q8NDX2 589 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 PI4K2BQ8TCG2 481 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 APPBP2Q92624 585 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 SWAP70Q9UH65 585 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 GJD2Q9UKL4 321 aa22.08■■□□□ 1.13
CLN6-214ENST00000636314 ZMYND8Q9ULU4 1186 aaPredicted RBP22.08■■□□□ 1.13
CLN6-214ENST00000636314 MPHOSPH10O00566 681 aaKnown RBP22.06■■□□□ 1.12
CLN6-214ENST00000636314 RNF113AO15541 343 aaKnown RBP22.06■■□□□ 1.12
CLN6-214ENST00000636314 CYP2B6P20813 491 aa22.06■■□□□ 1.12
CLN6-214ENST00000636314 ZYXQ15942 572 aaKnown RBP22.06■■□□□ 1.12
CLN6-214ENST00000636314 USP17L2Q6R6M4 530 aa22.06■■□□□ 1.12
CLN6-214ENST00000636314 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
CLN6-214ENST00000636314 NBPF3Q9H094 633 aa22.06■■□□□ 1.12
CLN6-214ENST00000636314 COL6A3P12111 3177 aa22.06■■□□□ 1.12
CLN6-214ENST00000636314 USP17L12C9JPN9 530 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 USP17L21D6R901 530 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 TRIB2Q92519 343 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 DYNLL2Q96FJ2 89 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 MORF4L1Q9UBU8 362 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 LAMA3Q16787 3333 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
CLN6-214ENST00000636314 CYP2D7A0A087X1C5 515 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 HOXA7P31268 230 aaPredicted RBP22.04■■□□□ 1.12
CLN6-214ENST00000636314 USP14P54578 494 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 C12orf60Q5U649 245 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 EXOC6Q8TAG9 804 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 OSBP2Q969R2 916 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 STRBPQ96SI9 672 aaKnown RBP22.04■■□□□ 1.12
CLN6-214ENST00000636314 C11orf49Q9H6J7 331 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 EMILIN3Q9NT22 766 aa22.04■■□□□ 1.12
CLN6-214ENST00000636314 ARPP21Q9UBL0 812 aaPredicted RBP22.04■■□□□ 1.12
CLN6-214ENST00000636314 GPAA1O43292 621 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 PEX10O60683 326 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 SYN1P17600 705 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 GUCY1A2P33402 732 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 SEPT2Q15019 361 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 TMEM179Q6ZVK1 233 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 C12orf42Q96LP6 360 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 P2RX7Q99572 595 aaKnown RBP22.03■■□□□ 1.12
CLN6-214ENST00000636314 GDF15Q99988 308 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 KIAA1683Q9H0B3 1180 aa22.03■■□□□ 1.12
CLN6-214ENST00000636314 RWDD1Q9H446 243 aaPredicted RBP22.03■■□□□ 1.12
CLN6-214ENST00000636314 DLL1O00548 723 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 PRKAR2AP13861 404 aaKnown RBP22.02■■□□□ 1.12
CLN6-214ENST00000636314 BMP8BP34820 402 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 HERVK_113P62684 666 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 CTR9Q6PD62 1173 aa22.02■■□□□ 1.12
CLN6-214ENST00000636314 GPRC5AQ8NFJ5 357 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms