RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	DDAH1	O94760	285 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	GDF11	O95390	407 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	HSP90AA1	P07900	732 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	VEGFA	P15692	232 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	GUCY1A2	P33402	732 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	JAG1	P78504	1218 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	TROAP	Q12815	778 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	SUPT20HL1	Q3ZLR7	823 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	EAPP	Q56P03	285 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	PPP4R3B	Q5MIZ7	849 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	PRAMEF18	Q5VWM3	479 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	DCAF15	Q66K64	600 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	SYNE3	Q6ZMZ3	975 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	KRT26	Q7Z3Y9	468 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	MICU3	Q86XE3	530 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	SPRYD3	Q8NCJ5	442 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	ATAD5	Q96QE3	1844 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	TMEM47	Q9BQJ4	181 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	MYL10	Q9BUA6	226 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	KAT14	Q9H8E8	782 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	KANSL2	Q9H9L4	492 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	STX8	Q9UNK0	236 aa		11.22	□□□□□ -0.61
CACNA1A-223	ENST00000636058	TTLL1	O95922	423 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	GH2	P01242	217 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CALM1	P0DP23	149 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CALM2	P0DP24	149 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CALM3	P0DP25	149 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	TOP1	P11387	765 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	DDIT3	P35638	169 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CAP2	P40123	477 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	METAP2	P50579	478 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CCT2	P78371	535 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	SEPT2	Q15019	361 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CATIP	Q7Z7H3	387 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	RAB11FIP4	Q86YS3	637 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CLEC10A	Q8IUN9	316 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CHMP4C	Q96CF2	233 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	LLPH	Q9BRT6	129 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	ZNF341	Q9BYN7	854 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	RRAGC	Q9HB90	399 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	NCOA5	Q9HCD5	579 aa	Known RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	CABP5	Q9NP86	173 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	FOXD4L1	Q9NU39	408 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	ZNF112	Q9UJU3	913 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	ZBTB21	Q9ULJ3	1066 aa		11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.21	□□□□□ -0.61
CACNA1A-223	ENST00000636058	MYH4	Q9Y623	1939 aa		11.21	□□□□□ -0.62
CACNA1A-223	ENST00000636058	PAPPA2	Q9BXP8	1791 aa		11.21	□□□□□ -0.62
CACNA1A-223	ENST00000636058	GOLGA8A	A7E2F4	631 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	DHX16	O60231	1041 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CTNND1	O60716	968 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CTDNEP1	O95476	244 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	POTEI	P0CG38	1075 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	POTEJ	P0CG39	1038 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	RXRA	P19793	462 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CDC27	P30260	824 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	PPP2R5B	Q15173	497 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CDC37L1	Q7L3B6	337 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	SIAH1	Q8IUQ4	282 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	FANCB	Q8NB91	859 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	PNMA1	Q8ND90	353 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	NSUN7	Q8NE18	718 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	MKL1	Q969V6	931 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	MAP3K14	Q99558	947 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CWC22	Q9HCG8	908 aa	Known RBP	11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	GINM1	Q9NU53	330 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	NYAP2	Q9P242	653 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	DOCK1	Q14185	1865 aa		11.2	□□□□□ -0.62
CACNA1A-223	ENST00000636058	ASNS	P08243	561 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	EEF2	P13639	858 aa	Known RBP	11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	ADD1	P35611	737 aa	Known RBP	11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	ICA1	Q05084	483 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	RAB3GAP1	Q15042	981 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	RTN1	Q16799	776 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	DLK2	Q6UY11	383 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	USP48	Q86UV5	1035 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CCDC144CP	Q8IYA2	1237 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	SMARCC2	Q8TAQ2	1214 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	NUP133	Q8WUM0	1156 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	KLRG1	Q96E93	195 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CDCA5	Q96FF9	252 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	NMRK2	Q9NPI5	230 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CLIP2	Q9UDT6	1046 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	SYNPO2	Q9UMS6	1093 aa		11.19	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CCDC196	A0A1B0GTZ2	297 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	PTPDC1	A2A3K4	754 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	JAK2	O60674	1132 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	INPP5B	P32019	993 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	GRM4	Q14833	912 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	NTRK3	Q16288	839 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	LDHD	Q86WU2	507 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	LRRC47	Q8N1G4	583 aa	Known RBP	11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	CTCFL	Q8NI51	663 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	WRNIP1	Q96S55	665 aa		11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNA1A-223	ENST00000636058	RBM28	Q9NW13	759 aa	Known RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms