RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 KCNQ5Q9NR82 932 aa13.49□□□□□ -0.25
TP53-228ENST00000635293 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
TP53-228ENST00000635293 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
TP53-228ENST00000635293 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
TP53-228ENST00000635293 COL4A5P29400 1685 aa13.49□□□□□ -0.25
TP53-228ENST00000635293 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
TP53-228ENST00000635293 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 YEATS4O95619 227 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 XBP1P17861 261 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 GNAQP50148 359 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 GRM4Q14833 912 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
TP53-228ENST00000635293 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 DDX4Q9NQI0 724 aaKnown RBP13.48□□□□□ -0.25
TP53-228ENST00000635293 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 MMP1P03956 469 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
TP53-228ENST00000635293 NOVP48745 357 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 DHX36Q9H2U1 1008 aaKnown RBP13.48□□□□□ -0.25
TP53-228ENST00000635293 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
TP53-228ENST00000635293 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
TP53-228ENST00000635293 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
TP53-228ENST00000635293 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
TP53-228ENST00000635293 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
TP53-228ENST00000635293 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
TP53-228ENST00000635293 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
TP53-228ENST00000635293 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
TP53-228ENST00000635293 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.25
TP53-228ENST00000635293 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
TP53-228ENST00000635293 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 ATRNL1Q5VV63 1379 aa13.46□□□□□ -0.25
TP53-228ENST00000635293 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.26
TP53-228ENST00000635293 TOP1P11387 765 aaKnown RBP13.46□□□□□ -0.26
TP53-228ENST00000635293 GUCY1A2P33402 732 aa13.46□□□□□ -0.26
TP53-228ENST00000635293 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.26
TP53-228ENST00000635293 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.26
TP53-228ENST00000635293 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.26
TP53-228ENST00000635293 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.26
TP53-228ENST00000635293 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.26
TP53-228ENST00000635293 SYCE3A1L190 88 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 ENTPD3O75355 529 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
TP53-228ENST00000635293 STK38Q15208 465 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 PKN1Q16512 942 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
TP53-228ENST00000635293 ZNF277Q9NRM2 450 aaPredicted RBP13.45□□□□□ -0.26
TP53-228ENST00000635293 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 STX8Q9UNK0 236 aa13.45□□□□□ -0.26
TP53-228ENST00000635293 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 NFIAQ12857 509 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 ANO1Q5XXA6 986 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 NOSTRINQ8IVI9 506 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
TP53-228ENST00000635293 CMTR1Q8N1G2 835 aaKnown RBP13.44□□□□□ -0.26
TP53-228ENST00000635293 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
TP53-228ENST00000635293 LINC00301Q8NCQ3 95 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 GMLQ99445 158 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 A0A1W2PQD8 194 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 SCG2P13521 617 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 SHMT1P34896 483 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
TP53-228ENST00000635293 CCDC82Q8N4S0 544 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
TP53-228ENST00000635293 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
TP53-228ENST00000635293 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
TP53-228ENST00000635293 PSMD14O00487 310 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 SMARCA1P28370 1054 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 MMP14P50281 582 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
TP53-228ENST00000635293 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
TP53-228ENST00000635293 JMYQ8N9B5 988 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 PHF20Q9BVI0 1012 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 NUP62CLQ9H1M0 184 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 PI4KBQ9UBF8 816 aa13.43□□□□□ -0.26
TP53-228ENST00000635293 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms